KEGG   Tetragenococcus halophilus NBRC 12172: TEH_13400
Entry
TEH_13400         CDS       T01640                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
thl  Tetragenococcus halophilus NBRC 12172
Pathway
thl03410  Base excision repair
thl03430  Mismatch repair
thl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:thl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TEH_13400 (recJ)
   03430 Mismatch repair
    TEH_13400 (recJ)
   03440 Homologous recombination
    TEH_13400 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:thl03400]
    TEH_13400 (recJ)
DNA repair and recombination proteins [BR:thl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     TEH_13400 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     TEH_13400 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      TEH_13400 (recJ)
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1 BsuPI
Other DBs
NCBI-GeneID: 11259884
NCBI-ProteinID: BAK94667
UniProt: A0AAN1VR41
LinkDB
Position
1343241..1345538
AA seq 765 aa
MKPANYNWQLPSDVELPEEFIDQLKKEKIPSFLGKLLWQRGIQSPQEIATFFHPSLDQLH
DPFQLFDMEEAVSRVQQALENEEKILIYGDYDADGITSTSLIKETLELLGADVDYYLPNR
FKDGYGPNIEVYKEKITEGVQLILTVDNGVSGHEAIDFANSQNVDVIVTDHHELPQSLPD
AYAIIHPRHPEGQYPFGELAGVGVAFKFACALLDEVPTDFLDLVAIGTVADMVSLTDENR
ALVVFGLEALKQTQRIGLLELLRVSQIRLEEVDESTIGFAIAPRLNALGRLQDPNEAVEL
LTTFDQEKAAYLSEQLNQVNTQRKAITQEITEEAMQQLSPDKKVQIIAGENWNEGVLGIV
AGNIAQKVGKPTIVLTQTQEGLLKGSGRSVDTVNLFKLLDQTRELMTSFGGHHAAVGLSI
QKENLSLLIKKVNEILDSNNIQPANQLSVDAVLSLSDVKLQHIEALQNLAPFGMDNPLPY
ILFKDCSAINTRTVGADGKHLKLSLKDSSEENVEGIGFGFGPDMLEFQSEFIDIVAQLSI
NEWNHKRIPQIILKDYRINHMQVFDYRSKKHQQNLTFVEPTLFVSFSEKESKKIEERIEH
PVVTYKDSQDFLAAIEKTTFNQLVLFNCPIQLEEAKAAIKAAQVSRVFFLCSAKDDAYLD
GVGTREQYAKLFHFISKQQQVDVRYKLPVIAQYLAIPEKLLFFMIQVFFDLGFVTITDGI
MNQVQDPKPQALTESQAYQKRLNKIKTEEFLLLSDLPSLKSWLAT
NT seq 2298 nt   +upstreamnt  +downstreamnt
ttgaaaccagcaaattataattggcaacttccatcagatgtagaattgccagaagaattt
attgatcaattaaaaaaagaaaagatacctagctttttgggaaaacttctgtggcaacgt
gggattcaaagtccgcaggaaatagcaactttttttcatccgtcgcttgatcaattacat
gacccatttcaactatttgatatggaagaggccgtttcacgggtgcaacaagcactggaa
aatgaagaaaaaattttgatttatggtgactacgatgctgatggtattacgagtacatca
ctgataaaagaaacattggagcttttaggtgccgatgttgattattatttacccaatcgc
tttaaagatggatatggtcctaatatagaggtatataaagaaaaaataactgaaggtgtt
caactgatacttacagttgataacggcgtttctggccatgaagcaattgattttgctaac
agtcagaatgtagatgtaatcgttacggatcaccacgaattaccccagtcattgcctgat
gcttatgctattattcatccgcgtcatccagaaggacaatacccttttggtgaactagcc
ggcgttggtgttgcttttaagtttgcttgtgcgttacttgatgaagtacccacagacttt
ttagatttagtagccatcggtaccgtcgctgatatggtttcacttactgatgaaaatcgc
gcgctcgttgtttttggactagaggctttaaaacaaacacagcgaatcggtttacttgaa
ttgttacgggtgagtcaaatccgtttagaagaagtagacgagtcaaccattggttttgcg
atcgcgcccagattaaacgctttaggacgtttgcaagatcctaatgaagcggtagagtta
ttaactacttttgatcaagagaaagctgcctacttatctgaacaattgaatcaagtgaat
acacaaagaaaagcaattacccaagaaataactgaagaagccatgcaacaattatctccg
gataaaaaagttcaaatcattgcaggtgaaaattggaatgaaggcgtactagggattgta
gcaggaaatattgcacaaaaagtaggaaaacctacgattgttttgactcagacgcaagaa
ggactcttaaagggttcaggacgcagtgttgatacagttaatttattcaagcttttagac
caaactcgcgaattaatgaccagttttggcggacaccatgccgctgttggacttagtata
caaaaagagaatttgtctttactaataaaaaaagtgaatgaaatacttgattcaaataat
attcagccggctaatcaactttcagttgatgcagtacttagcttgtcagatgttaaatta
caacatattgaagcgctgcaaaatttagcgccttttggtatggataatcctttgccgtat
attttgtttaaagattgttccgcgataaatacccggactgttggagcggatggcaaacat
ctgaaactgtccttaaaagattcttctgaagaaaatgtggaaggcatcggctttggtttt
ggtcctgatatgttagaatttcaaagtgaatttattgatattgtagcgcaactgtcgatt
aatgagtggaatcataaacgtattcctcaaattattttaaaggattatcgtatcaatcac
atgcaagtatttgactatcgttcaaaaaagcatcaacaaaatctaacatttgtagagcca
acattgtttgttagtttttctgaaaaagaaagcaaaaagattgaggaaagaattgaacat
ccggtagtcacttataaagattcacaggattttcttgctgcaatagaaaagactactttt
aatcagttggtactttttaactgtccaatacaattagaagaggctaaagcagctattaaa
gcagctcaagtctcacgtgtatttttcttgtgttcagctaaagatgatgcttatctagat
ggcgtaggcacgcgagaacagtatgctaagttatttcactttatctccaaacaacagcaa
gtggatgtgagatacaagttacccgttattgcacaatatttagctattccagaaaaatta
ttgttttttatgattcaagtgttttttgacttaggatttgttacaataacagacgggatt
atgaatcaagtacaagatccaaaacctcaagcattgaccgaaagccaagcttatcaaaaa
cggttgaacaaaatcaaaacagaagagtttttattgctaagtgatttaccctctttgaaa
agttggttagcaacataa

DBGET integrated database retrieval system