Tetragenococcus halophilus NBRC 12172: TEH_14620
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Entry
TEH_14620 CDS
T01640
Name
(GenBank) putative RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
thl
Tetragenococcus halophilus NBRC 12172
Brite
KEGG Orthology (KO) [BR:
thl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thl03009
]
TEH_14620
Enzymes [BR:
thl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
TEH_14620
Ribosome biogenesis [BR:
thl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TEH_14620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Cons_hypoth95
Methyltransf_31
Methyltransf_15
RrnaAD
N6_N4_Mtase
MTS
Methyltransf_25
PrmA
TRM5-TYW2_MTfase
PCMT
DOT1
Motif
Other DBs
NCBI-GeneID:
11259967
NCBI-ProteinID:
BAK94789
UniProt:
A0AAN1VR73
LinkDB
All DBs
Position
complement(1469234..1470607)
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AA seq
457 aa
AA seq
DB search
MEEMPVKKNQELEVTVVDLSYLGMGVAKVDGYPIFVENALPQEKILVRIVKVGKKFGFGK
MLSIIQKSPYRQEVENEDLLRTGIAPLSHLKYEQQLVFKQEQVRNVLKKTAKMPEIQVEK
TIGMQQPFGYRNKAQIPIRKIDGILQTGFYRKNSHELIPIDHFFIQDPAIDAAIIVIREI
LQQFEVKAYNEKNNSGFLRHIVIRRGYHTHEMMVVLVTRKEHFFQGEKIAQAIQEKLPEV
VSIIQNINPKQTNVILGEQEKVLLGRSYVYDQLLGKTYRISAKSFYQVNTPQAEVLYQKA
FELADLKKSDVVIDAYSGIGTIGLSLANQVAHVYGMETIKQAVIDAQENAKLNGIKNAEY
VTGKAEDIMPRWKEDGIHPNVIFVDPPRKGLDQSFIETACQMKPEKFIYISCNPATMARD
LKVFAEQEYFTDSIQPVDLFPQTHHVETIVLLEKKSS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatgcctgttaaaaaaaatcaggagttagaagtaacggtcgttgatttatct
tatttgggcatgggcgttgcaaaggttgatggctacccaatctttgtcgaaaatgcttta
ccacaagaaaagatactggttagaattgttaaagtaggtaaaaagtttggctttggaaag
atgctttctatcatccaaaaaagcccctaccgtcaagaagtagaaaatgaggatctatta
cgcacagggattgcaccccttagtcatttaaaatatgaacaacaattagtatttaaacaa
gaacaagtgagaaatgttttaaaaaagacagctaaaatgcctgagatccaagttgaaaaa
acgatagggatgcagcaaccctttggttatagaaataaagcacaaattcccattcgtaaa
attgacggtattttacaaacaggtttttatcgtaagaacagtcatgaattaatacctatc
gatcatttttttattcaagatcctgcaattgacgcagcaattatcgttattcgagaaatt
ttacaacaatttgaagtaaaagcctataatgaaaaaaataatagcggatttttacgacat
atcgttattcgtcgtggctatcatacacatgaaatgatggttgttttagtcactcgtaaa
gaacactttttccaaggagaaaaaattgcgcaggctattcaagaaaaactgccagaagtt
gtttctatcatacaaaatattaatccaaagcaaacaaacgtcatcttaggcgagcaagaa
aaagtcttgttgggtcgaagttatgtctacgatcaattattaggaaaaacctatcgtatt
tctgctaaatctttttatcaagtcaatacgccacaagccgaagttttatatcaaaaagcc
tttgaattagctgatttaaaaaaatcagacgttgtcattgacgcttattcaggaatcgga
accattggattgtcactagcaaaccaagtagcgcatgtttatggcatggagaccatcaaa
caagcagtaatagatgctcaagaaaatgccaaactgaatggtataaaaaatgcagaatat
gtaacaggtaaagcggaggatattatgcctcgatggaaagaagacggaatccatcccaat
gtgattttcgttgatccgccgcgtaaaggattagatcaatcttttattgaaactgcctgt
cagatgaaaccagaaaaattcatctatatttcatgtaatccggcaacgatggcaagagat
ctaaaagtatttgcagaacaagagtactttacagatagtatccaacctgttgacttattc
ccgcaaacgcatcatgtggagactattgtattgctagaaaagaaaagctcttag
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