Tetragenococcus halophilus NBRC 12172: TEH_14680
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Entry
TEH_14680 CDS
T01640
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thl
Tetragenococcus halophilus NBRC 12172
Pathway
thl03420
Nucleotide excision repair
thl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TEH_14680 (pcrA)
03430 Mismatch repair
TEH_14680 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thl03400
]
TEH_14680 (pcrA)
Enzymes [BR:
thl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TEH_14680 (pcrA)
DNA repair and recombination proteins [BR:
thl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TEH_14680 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
TEH_14680 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
AAA_11
DEAD
DUF8079
Anticodon_2
Motif
Other DBs
NCBI-GeneID:
11261138
NCBI-ProteinID:
BAK94795
UniProt:
A0AAN1SGW5
LinkDB
All DBs
Position
complement(1477138..1479387)
Genome browser
AA seq
749 aa
AA seq
DB search
MPSQKELLKNMNQKQEEAITTTEGPLLLMAGAGSGKTRVLTHRIAYLIEEKSVNPWNVLA
ITFTNKAAKEMKERVKALLDVQAEGVWVSTFHSMCVRILRRDVDLIGYSQNFTIVDPAEQ
RTLMKNVLKTLDIDPKKYDPRGILGNISNAKNALLTPEEYQQTQGSYFEEIVGRCYEVYQ
KELRKNQSMDFDDLIMNTITLLKNNEEVLQYYQNKFQYIHVDEYQDTNHAQYILVNLLAK
RLKNLCVVGDADQSIYGWRGADMQNILDFEKDYPEAQTIYLEQNYRSTKNILQAANQVIT
NNQNRKDKKLWTDNTAGQTISYYRGDSERDEAQFVVKNIQQTIDTEGKEYGDFAVLYRTN
AQSRVIEEMLLKANIPYTMVGGHKFYDRKEIKDVLAYLNAIANPEDSLSLARIINVPKRG
IGPGTLEKLNDFADFNGMPLLEATENIELSNISGKVMKKLKAFGDMMVNFNQMIPYLSMT
ELTEEVLQKSGYYDELKSQNTLEAQARLENLDEFLTVTQEFDKQYENQAEEDRESPENKL
TVFLNDLSLLSDVDQYEEESSEVTLMTLHAAKGLEFPVVFLIGMEENIFPLARAAIEESE
LEEERRLAYVGITRAEEKLYLTNALSRMLYGKPQYNRPSRFIEEIDPELLSSDQPVIYKN
QRISAREPQERQNFAAKRNAGSKAVSTKNPTVAENTDWQIGDKAKHKKWGVGTVVKVSGN
QKDVELDIAFPNMGIKRLLAAFAPIEKVE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
gtgccatcccaaaaagaattattaaaaaacatgaatcaaaaacaagaagaagcaatcaca
acaactgaaggtccattacttttaatggcaggtgcgggtagtgggaaaacacgtgtacta
acacatcgtatcgcttatttaattgaagaaaaaagtgtaaatccttggaatgttttggcg
attacttttacaaataaagctgccaaggaaatgaaagaacgggtgaaagctttactagat
gttcaagcagaaggtgtttgggtctcgacctttcattcaatgtgtgtccgtattttaaga
agagatgtagatcttatcggctattcacaaaactttacaatagtggatcctgccgaacaa
cgcacattaatgaaaaatgtgttaaaaacactcgacatcgatcctaaaaaatatgatccg
cgagggattttaggaaacatctccaacgccaaaaatgctttacttacacctgaagagtat
caacaaacgcaagggagctattttgaagagattgtaggacgttgttatgaagtatatcaa
aaagaactacgcaaaaatcaaagcatggactttgacgatttaatcatgaatactattaca
ttacttaaaaataatgaagaagttttacagtattatcaaaataaatttcaatatatccat
gtagatgaatatcaagataccaaccatgcgcaatacattttagttaaccttttagctaaa
cgattaaaaaatttatgtgtggtaggagatgctgatcaaagtatttatggttggcgtggc
gcagatatgcaaaatattttggactttgaaaaagattatcctgaagcacaaacgatttac
ttagaacagaattatcgttcgactaaaaatattttacaagctgctaatcaagtcatcaca
aacaatcaaaaccgtaaagataaaaaattatggacagataatacagctggacaaacaatc
tcttactatcggggagattctgagcgagatgaagcgcaatttgtagttaaaaatatccag
caaaccattgacactgaaggaaaagaatatggagactttgctgtattatatcgtacaaat
gcacaatctcgtgtcattgaagagatgttattaaaagctaatattccttacactatggtg
ggaggacataaattctacgatcggaaagaaatcaaagatgtcctagcttacttaaatgcg
attgctaatcctgaggactcactgagtttagcgcgtattattaatgtacccaaacgtggt
attggaccgggaacgttagagaagttaaatgattttgccgattttaacggcatgccgctt
ttagaagcaacggaaaatattgaattgtcgaatataagtggtaaggtaatgaaaaaatta
aaagcattcggcgatatgatggttaattttaatcaaatgattccctatttgtccatgaca
gaattaacagaagaggtattacaaaaaagcgggtattacgatgagttaaaatctcaaaat
acacttgaagcccaagcccgtctggaaaacttagatgaatttcttactgttacacaagaa
tttgataagcagtatgaaaatcaagcagaagaagacagagaatcaccagaaaataagttg
actgtttttcttaatgacttatctttgctttctgatgtggatcaatatgaagaagaaagc
tcagaagtcactttaatgaccctgcatgcggcaaaaggtttagaatttccggtggttttt
ctcatcggaatggaagaaaatatcttcccgctggctcgtgcagcgatagaagaaagcgaa
ttagaagaggaacgtcgcttagcatatgttggtattacacgtgcggaggaaaaactatac
ttaacaaatgctctttctagaatgttatacggaaaaccacaatacaatcgtccttcacgc
tttatagaagaaattgatccagaattattgtcttctgatcaaccggttatttacaaaaat
caacgtatttctgcaagggagcctcaagagcgccaaaattttgctgctaaaagaaatgct
ggaagtaaagcagtctccactaaaaatccaacagttgcagaaaatacagattggcaaatt
ggggataaagccaaacataaaaaatggggagtaggcacggtcgtaaaagttagtgggaat
caaaaagacgtagaacttgatattgcttttcctaatatgggaattaaacgattattggca
gcttttgcgccaattgaaaaagtggaataa
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