Tetragenococcus halophilus NBRC 12172: TEH_20000
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Entry
TEH_20000 CDS
T01640
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
thl
Tetragenococcus halophilus NBRC 12172
Brite
KEGG Orthology (KO) [BR:
thl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thl03032
]
TEH_20000 (hup)
03036 Chromosome and associated proteins [BR:
thl03036
]
TEH_20000 (hup)
03400 DNA repair and recombination proteins [BR:
thl03400
]
TEH_20000 (hup)
DNA replication proteins [BR:
thl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TEH_20000 (hup)
Chromosome and associated proteins [BR:
thl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
TEH_20000 (hup)
DNA repair and recombination proteins [BR:
thl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
TEH_20000 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
Rpf1_C
Glycos_trans_3N
Ribosomal_L12
Motif
Other DBs
NCBI-GeneID:
11260325
NCBI-ProteinID:
BAK95327
UniProt:
A0AAN1VRQ1
LinkDB
All DBs
Position
complement(1999841..2000116)
Genome browser
AA seq
91 aa
AA seq
DB search
MANKAELIEKVAEATDLTKKDATAAVDAVFTTIQDSLASGEKVQLIGFGNFEVRSRAERK
GRNPQTGEEIKIPASKVPAFKPGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaagcagaattaatcgaaaaagttgcagaagcgactgatttgactaaaaag
gacgcaactgcagcagttgatgctgtgttcacaacgattcaagattctctagctagcggc
gaaaaagttcaattgatcggttttggtaacttcgaagtacgttctcgcgcagaacgcaaa
ggacgtaacccacaaactggtgaagaaattaaaatcccagcaagcaaagtaccagcattc
aaacctggtaaagctttaaaagacgctgtaaaataa
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