Tetragenococcus halophilus NBRC 12172: TEH_20060
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Entry
TEH_20060 CDS
T01640
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
thl
Tetragenococcus halophilus NBRC 12172
Pathway
thl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TEH_20060 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thl03019
]
TEH_20060 (recQ)
03400 DNA repair and recombination proteins [BR:
thl03400
]
TEH_20060 (recQ)
Enzymes [BR:
thl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TEH_20060 (recQ)
Messenger RNA biogenesis [BR:
thl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TEH_20060 (recQ)
DNA repair and recombination proteins [BR:
thl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TEH_20060 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
11260328
NCBI-ProteinID:
BAK95333
UniProt:
A0AAN1SHW0
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All DBs
Position
complement(2005267..2006679)
Genome browser
AA seq
470 aa
AA seq
DB search
MLEETLYRYFRYKSFRPGQKETINSLLEGNDSLAILPTGTGKSLCYQLPAYLREGTVLIV
TPLISLMEDQLASLQRNGEKRGVLLNGNLNEQEKMYVLDHFSSYKFVFLSPEMLMQEKIL
SKLQLYHIALFVVDEAHCISQWGIDFRPEYRNLKQAKKRLHNPVTLALTATATDEVKTEI
KNLLLSKNTVEHCYSVDRPNVSLSVIHTQAKLTDLKKLLDKAYGSVLIYCATRKKVEEVY
DRLKNDYIIGYYHGGLDSSQRRLLQEQFINDQLQILVCTNAFGMGVDKSDIRLVIHYELP
DSLENYMQEIGRSGRDQKPSNAVLLYQEKDEKIHHFMQQQAQQERQFFEFYLDQQLLSKL
TELQEKWLQQIKVSDQDSFLTQLRQNETEKQKKLKQMLDYIYFDGCRREFLLSYFGETLT
KIPERCCDFHGIKKVIDDKKEYCFSVNKTHWQEILLKMFKEENSQQFRKT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgttagaagaaacattatatcgttactttcgctataaaagttttcgtcctggtcaaaaa
gaaacgataaattcattactagaaggaaacgacagtttagctatacttccaactggtaca
ggaaagagcctttgttatcagctgcctgcatatttaagagagggcacagtactgatcgtt
actcctttaatttctttgatggaagatcaactggcttctttacaaagaaatggtgaaaaa
cgaggcgtgcttttaaatggtaatttgaatgaacaagagaaaatgtatgtattggaccat
ttttctagttataaatttgtttttttaagcccggaaatgcttatgcaggaaaaaatatta
tcaaaattacaactttatcatattgctttatttgttgttgacgaggcccattgcatttcg
cagtggggaattgattttcgacctgaatataggaatttaaaacaagctaaaaaacgtcta
cataaccctgtgacgctagctttgacagcaacagctactgatgaggtaaaaacagaaata
aaaaacttattgttaagtaaaaatactgtagaacactgctattctgtcgatcgtcctaat
gtctccttgtctgtcatacatacacaggcaaaattgacggatttgaaaaaactgctggat
aaagcttacggttcagtacttatttattgcgcaacaagaaaaaaagtagaggaagtctat
gatcgcttaaaaaacgattatattatcggctactatcatggtggattggatagcagccag
agaagacttctgcaggaacaatttattaatgatcagctacaaatcttagtctgtacaaat
gcgtttggtatgggcgttgataaatctgatattcgtttagtgattcattatgaactacct
gatagcttagaaaattatatgcaagagattggtagaagtggtcgcgatcaaaaacctagc
aacgcagttcttttatatcaagaaaaagatgaaaaaattcatcattttatgcagcaacaa
gcacaacaagagcgtcaattttttgaattttatttagatcagcaattactgagcaaatta
accgagctgcaagaaaaatggttacaacaaattaaagtttcagaccaagatagttttctt
acacaattgagacaaaacgaaacagaaaagcagaaaaaacttaaacaaatgcttgattat
atttattttgatggctgtaggcgagaatttttattgagttattttggagaaacattaaca
aaaattcctgaaaggtgttgtgattttcatggaataaaaaaagtaattgatgataaaaag
gaatactgtttttcggtaaataaaacacactggcaagaaattttactaaaaatgtttaaa
gaagaaaattcacaacaatttaggaagacataa
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