Tetragenococcus halophilus NBRC 12172: TEH_20100
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Entry
TEH_20100 CDS
T01640
Symbol
rluB
Name
(GenBank) pseudouridine synthase RluB
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
thl
Tetragenococcus halophilus NBRC 12172
Brite
KEGG Orthology (KO) [BR:
thl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thl03009
]
TEH_20100 (rluB)
Enzymes [BR:
thl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
TEH_20100 (rluB)
Ribosome biogenesis [BR:
thl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TEH_20100 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
SpaA
DUF348
Motif
Other DBs
NCBI-GeneID:
11260330
NCBI-ProteinID:
BAK95337
UniProt:
A0AAN1SIA7
LinkDB
All DBs
Position
complement(2009044..2009766)
Genome browser
AA seq
240 aa
AA seq
DB search
MQRLQKVIAHAGIASRRKAEEYITQGRVKVNGEVVKELGVQVAKKDQVEVDQVPIYQEEP
VYFMFYKPRGVISAASDDKNRTVVTDYFTEVKERIYPVGRLDYNTSGLLLLTNDGDFSQK
LMHPKYEIDKVYIAKVSGIATNKKLSPLSKKMHIEGKTLAPAKFEILSSDKKAQTSIVQL
TIHEGRNHQVKNMLKACGFPVEKLKRERYGHLTLENLQVGKYRELNKNDVNRLIEETKIK
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgattacaaaaagtgattgcccatgctggtattgcttctagaagaaaagcagag
gaatatatcacacaagggcgtgtgaaagttaacggagaagtggtcaaagagttgggggtt
caggtagctaaaaaagatcaagttgaagttgatcaagtacctatctaccaagaagaacct
gtttactttatgttttataaaccacggggcgttatttctgcggcttcagatgataaaaat
cgtacggttgtcacagattattttacagaagtaaaagaacggatttatccggttggccgc
ttggactataatacttctggattgttgcttttgacaaatgacggtgatttttctcaaaag
ttaatgcatcccaaatatgagatagacaaagtctatattgctaaagtaagtggcattgca
acaaacaaaaaactatcacctcttagcaaaaaaatgcatatcgaggggaaaacattagct
ccagcaaaatttgaaattttatcaagtgataaaaaagcacaaacgagtattgttcaattg
accattcatgaaggtcgcaatcaccaagtaaaaaatatgctaaaagcttgtggttttcca
gttgaaaaattaaagcgtgaacgttatggacatctgacactagaaaacttacaagttgga
aaatatcgcgaattgaataaaaatgatgtgaatcgtttaattgaagaaacaaaaataaaa
tag
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