Thermococcus cleftensis: CL1_0389
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Entry
CL1_0389 CDS
T02169
Name
(GenBank) DNA topoisomerase, type IA
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
thm
Thermococcus cleftensis
Brite
KEGG Orthology (KO) [BR:
thm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thm03032
]
CL1_0389
03400 DNA repair and recombination proteins [BR:
thm03400
]
CL1_0389
Enzymes [BR:
thm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CL1_0389
DNA replication proteins [BR:
thm03032
]
Prokaryotic type
DNA Topoisomerases
CL1_0389
DNA repair and recombination proteins [BR:
thm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CL1_0389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
DUF4364
Motif
Other DBs
NCBI-ProteinID:
AFL94600
UniProt:
I3ZSB6
LinkDB
All DBs
Position
complement(354228..356378)
Genome browser
AA seq
716 aa
AA seq
DB search
MVTLIIAEKPNVARKIAYALAEGKPVRKTIGKVSYYEFTRDGKRIIVAPAVGHLFSLAPK
TKTYGYPVFDIEWVPVYVAEKGKGYAKDYIKALATLAKRADEFVVACDYDTEGEVIGYTA
LKYACGVDPTRAKRMKFSALTKKDLLKAWYNLEPTINFGMADAGIARHVLDWYWGVNLSR
ALTSAIKRASGKWQVLSTGRVQGPTLKFLVEREREIANFQPKPYWVIKMTLEKNSKSYTA
TYERDKIWDEEEAKRIVQEAKKGPAFVERVEVKQQKRNPPVPFDLGTLQREAYSAFGYSP
KKTLEIAQKLYERALCSYPRTSSQKLPKNLNFRSILQNLAKLPEYKPFAHELLGKDKLRP
VEGKKEDPAHPAIYPTGELPKAGELTRDEANLYDLIVRRFLALFMEPAVREIARVIINSN
NHRFILSGARTVKEGWLKVYGKYVKFDEVILPAFKEGEQVRVLQIKREKKKTKPPARYSP
AAVIKKMEDLGIGTKATRAQILETLYSRGYIEGKKKIKVTPLGMRVVEALEKNVPDIVSV
ELTRAFEEKMEEIMAGKAKKDEVIEESRGQLIKILKVFKEKELDIGKMLLETTGTGVTTS
KDSAKVSEDSAKVPKGTASSKAQEGRKTGKGLVLGKCPKCGGDLVVRYNRKTGKRFVGCS
NWPKCDVTYPLLQRGEIIPTDKTCCNGAPVVKIREKGREYEICVDMNCKEWKKKGN
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgctcatcatagcggaaaagcccaacgttgcccgtaaaatcgcctatgcgtta
gcggaaggcaagcccgtcaggaagaccatcggaaaggtgagctactacgagttcacccga
gacgggaagagaataatcgtagctccggcggttggccatctcttctcactcgcgccgaaa
actaaaacctacggctatcctgtcttcgatatagaatgggttcccgtctacgtcgccgag
aagggcaagggctacgcgaaggactacatcaaagccctggccaccctcgccaagagggcc
gacgagttcgtggttgcctgcgactacgacaccgagggtgaggttattggttatactgct
ctcaagtacgcctgcggcgttgaccccaccagggcgaagagaatgaagttctccgcctta
acaaagaaggacctcctgaaggcatggtacaacctcgaaccgacgataaacttcggaatg
gccgatgcaggaatagcgcgccacgtcctcgactggtactggggagtcaatctctcccgc
gcccttacctcggccataaagcgcgccagcggcaagtggcaggttctctcaaccggccgc
gtccaggggccaacgctgaagttcctagtggagagggagagggagatagccaactttcag
cccaaaccatactgggtcatcaaaatgaccctcgagaagaacagcaagagctacaccgca
acctacgagagggacaaaatctgggacgaggaggaggcgaagagaatcgttcaggaggcc
aagaaggggccggccttcgttgaaagggtggaagtcaaacagcagaagaggaatccgccc
gtccccttcgacctcggaacactccagcgggaagcgtattcggcgtttggctactccccg
aagaagactttggagattgcacagaagctgtacgagcgagccctgtgctcatacccccgc
acctcctcgcagaagctccccaagaacctcaacttccgctccattctccagaacctggca
aagctacccgagtacaagcccttcgcccacgagcttctgggaaaggataagctcaggccc
gtagagggcaagaaggaagaccctgcccacccggcgatataccccaccggagagcttcca
aaagctggagagctgaccagagacgaggcgaacctctacgacctcatagtgagacgcttc
ctggccctcttcatggagcctgccgtgagggagatagcgagggtgataataaactccaac
aatcatcgcttcattttgagtggggcgagaaccgtaaaggagggctggctgaaggtctat
ggtaaatacgtcaagttcgacgaggttattttgcccgcctttaaggagggcgagcaggtc
agggttctccagataaagcgcgagaagaagaagacgaagcccccggcgagatactccccg
gcggccgtaatcaaaaagatggaagaccttggaattggaactaaagccacgcgcgcccaa
atccttgagacgctttacagcaggggctacatcgagggcaagaagaagataaaggtcacc
cccctcggaatgcgcgttgtggaggccctcgagaagaacgtgccggacatagtgagcgtt
gagctgacgagggccttcgaggagaagatggaggagataatggcgggaaaggcaaagaag
gacgaagtcatcgaggagagcaggggacagttgattaaaatcctgaaggtcttcaaggag
aaggagctggacataggtaagatgctccttgaaacgacgggaactggggtaacgacctct
aaagactccgccaaggtttcggaggactctgcgaaggtgcccaagggaactgccagctcc
aaggctcaagaaggccggaaaacggggaaggggctcgttctcggcaagtgccccaagtgc
ggcggtgacctggtcgttcgctacaacaggaaaacgggcaagcgcttcgttggttgctcc
aactggcccaaatgcgacgtcacctacccccttctccagcggggagagataatcccgacg
gacaagacctgctgcaacggtgcacccgtggtgaagattcgcgagaagggaagggagtac
gagatatgcgtggatatgaactgcaaggagtggaagaaaaagggtaattag
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