Thermococcus cleftensis: CL1_0440
Help
Entry
CL1_0440 CDS
T02169
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
thm
Thermococcus cleftensis
Pathway
thm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
thm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CL1_0440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thm03021
]
CL1_0440
Enzymes [BR:
thm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CL1_0440
Transcription machinery [BR:
thm03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
CL1_0440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zf_2nd_IFT121
DUF5817
Auto_anti-p27
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-ProteinID:
AFL94649
UniProt:
I3ZSG5
LinkDB
All DBs
Position
406392..409760
Genome browser
AA seq
1122 aa
AA seq
DB search
MASRGPTVVDVTPDDLWLVMEAYWKERGLVRQHLDSYNAFIDHGMQQVIDEFGGLKPDIP
DFEVKFGKIRLGEPEFQEAQGQRKPLYPMDARIRNLTYSAPLYLELIPVIKGIEQEPVEV
RIGELPIMLKSKACRLYGLSDEELIKLGEDPKDPGGYFIINGSERVIVSIEDLAPNKTLV
ERDERQNRIIAKVFSYRHGYRALITVERRKDGILYVNIPNVPRPVKFVYVMRALGLLSDK
EIVEAVSDDPRIQQVLFDNLEDASDITTQEEALDYIGKLSLPGQPREYRLRRAEHIIDNN
LLPHMGVEPERRRAKAYYLGMMALKVLELSLGLRGEDDKDHYANKRLKLAGDLLRDLFRV
AFGQLVKDMQYQMTKTYQRKGERYTFENIQRFVRNSIRPDVLSERIEHALATGAWPGGRT
GVSQLLDRTNYMSTLSHLRRVTSPLSRDQPHFEARDLHGTHWGRICPTETPEGPNCGLVK
NLALMAQITTGIPEKEVREYLSKLGVVPIEERRPNPSLWRIYLNGVLIGTIEDGESLVKR
IRSDRRSGRISDVINVALYQDEDVKEIYVNSDDGRVRRPLIIVENGKPRLTREHVEGIKT
GQLTWSDLIKMGIIEYLDAEEEENALVATWPWEVTEEHTHLELMPAAILGIPASLVPYPE
HNAAPRNTYGAGMAKQSLGFGAANFRIRVDTRGHLMHYPQVPLVNSRIMKAVGFEERPAG
QNFVVAVLSYSGYNMEDAVIMNKASIERGLARSTFFRTYEAEEKRYLGGQTDRFEVPDPT
IQGYLGEKYYRHLDEDGIIFPESKVSGKDVLVGRTSPPRFLEEQSGLGGIILQERRETSV
TVRPSERGIVDKVIITETGDGTKLVKITTRDLRIPELGDKFASRHGQKGVIGLIVPQEDM
PWTESGIVPDLIVNPHGIPSRMTVGQLIEAIGGKVAALKGRRVDGTAFIGEPEEKLRKEL
EELGFKHSGREIMYDGITGRRLEADIFVGVIYYQRLHHMVADKMHARSRGPVQVLTKQPT
EGRAREGGLRFGEMERDVLIGHGAAMLLIERLLEESDKTEVWVCESCGHLALEDKRRGKV
YCPVCGEEERISKVEMSYAFKLLLDELKAMVIRPSLNITDRV
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgagaggacccaccgttgttgatgtcacccctgacgacctctggctcgttatg
gaagcctactggaaggagaggggacttgtaaggcagcaccttgattcttacaacgccttc
atcgaccacggaatgcagcaggttatagacgagttcggtggcctcaagcccgacattccg
gactttgaggtcaagtttggtaaaatccgcctgggcgagcccgagttccaggaggcccag
ggccagaggaagcccctctatccaatggacgccaggataaggaacctgacctactcggcc
ccgctctacctcgagcttattccagttatcaagggaatagagcaggaacccgtcgaggtt
cgcatcggcgagctcccgataatgctcaagtccaaggcttgcaggctttacggcctcagc
gacgaggagcttataaagctcggcgaggacccgaaggaccccggaggatacttcatcatc
aacggctccgagagggttatagtctccattgaggacctcgcccccaacaagaccctggtg
gagagggacgagaggcagaacaggataatcgccaaggtcttctcctacaggcacggctac
agggccctgataacggtagagagaaggaaggacggaatactctacgtgaacataccgaac
gtccccaggccagttaagttcgtctacgtcatgcgcgccctcggtctcctcagcgataag
gagatagttgaagctgtcagcgacgacccgaggatacagcaggttctcttcgacaacctc
gaggacgccagcgacataaccacccaggaggaggccctcgattacataggaaagctctcc
ctcccaggccagcccagggagtacaggctcaggagggccgagcacattatagacaacaac
ctcctgccccacatgggcgtcgagcccgagaggagaagggccaaagcttactacctcggt
atgatggccctcaaggttctggagctttcacttggcctccgcggcgaggacgacaaggac
cactacgccaacaagaggctcaagctggcgggagacctcctcagggacctcttccgcgtt
gccttcggccagctcgtcaaggacatgcagtaccagatgaccaagacctaccagaggaag
ggcgagcgctacaccttcgagaacatacagcgcttcgtgaggaactccataaggccggac
gtgctgagcgagaggattgagcacgccctcgcgaccggtgcgtggccaggtggaagaacc
ggtgtcagtcagctcctcgacaggaccaactacatgagcacgctctctcacctcaggcgc
gtcacttccccgctcagcagggaccagccccacttcgaggcccgtgacctccacggaacc
cactggggaaggatatgcccgacggaaacgccggaaggtccaaactgtggtctggtcaag
aatcttgctttgatggcccagataaccaccggaatcccggagaaggaagtcagggagtac
ctgagcaagctcggcgtcgttcccatcgaggagagaaggccgaacccgagcctctggagg
atttacctcaacggagttctcattgggaccatcgaggacggcgagagcctggtaaagagg
ataaggagcgataggagaagcggaaggataagcgacgtcataaacgttgccttataccag
gacgaggacgtcaaggagatatacgtgaacagcgatgacggtagggtcaggagacccctc
atcatcgtcgagaacggcaagccgagactcacccgcgagcacgtcgagggcataaagacc
ggccagctcacctggagcgacctcatcaagatgggcatcatcgagtacctcgacgctgag
gaggaggagaacgccctcgtcgccacttggccctgggaggttaccgaggagcacacccac
ctcgagctgatgcccgctgcgattctcggaatacctgcctcactcgttccgtacccggag
cacaacgcggccccgcgtaacacctacggtgccggtatggccaagcagagcctcggcttt
ggagcggccaacttcaggataagggtggacacgcgcggccatctgatgcactacccgcag
gtcccgcttgtgaactcgaggataatgaaggcagtcggtttcgaggagaggccagctggc
cagaacttcgtggtcgcagttctcagttactcgggatacaacatggaagatgccgtcata
atgaacaaggcctccatagagcgcggcttggctcgttcaaccttcttcagaacctacgag
gcagaggagaagcgctacctcggtggccagaccgaccgcttcgaggttcccgacccgaca
atacagggctatctgggcgagaagtactacaggcacctcgacgaggacggcataatcttc
ccggagtccaaggtctccggcaaggacgttctcgttggaagaacctccccaccgaggttc
cttgaggaacagagcggccttggaggcataattctccaggagaggcgcgagacgagcgta
acggtaaggcccagtgagaggggtatagtggacaaggtcatcataaccgagaccggcgat
gggaccaagctcgtgaagataaccaccagggatctcaggatcccagagcttggagacaag
ttcgcctcgaggcacggccagaagggtgttatcggcctcatagtcccgcaggaggacatg
ccctggaccgagagcggaatcgtcccggacctcatagtgaacccccacggtatcccgagc
cgtatgaccgtcgggcagctcatagaggcaataggtggaaaggttgcggcgctgaaggga
aggagagtggacggtacagcgttcatcggcgagccagaggagaagctcaggaaggagctc
gaggagcttggattcaagcacagcggaagggaaatcatgtacgacggcataaccggaaga
aggctcgaggctgatatattcgtcggcgtcatctactaccagaggctccaccacatggta
gctgacaagatgcacgcccgttcgaggggtccagttcaggttctcaccaagcagccgacc
gagggtagggccagggaaggcggtctcaggttcggtgagatggagcgtgacgtcctcatc
ggacacggtgcagcgatgctcctgatcgagaggttgctcgaggagagcgacaagaccgag
gtctgggtctgcgagagctgtggacacctagccttggaggacaagcgcagaggaaaggtc
tactgcccggtctgtggagaggaagagaggataagcaaggtggagatgagctacgccttc
aagctgttgctggacgagctgaaggccatggtgataaggccctccctcaacataaccgac
agggtgtga
DBGET
integrated database retrieval system
