Thermococcus cleftensis: CL1_0441
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Entry
CL1_0441 CDS
T02169
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
thm
Thermococcus cleftensis
Pathway
thm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
thm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CL1_0441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thm03021
]
CL1_0441
Enzymes [BR:
thm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CL1_0441
Transcription machinery [BR:
thm03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
CL1_0441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
AFL94650
UniProt:
I3ZSG6
LinkDB
All DBs
Position
409765..412482
Genome browser
AA seq
905 aa
AA seq
DB search
MQSMKKVIGSIEFGILSPQEIRKMSAAEITVPDTYDDDGYPIEGGLMDKRLGVVDPGLRC
ETCGARAGECPGHFGHVELARPIIHVGFAKTIHRVLESTCRECGRIKLTDEEIEEYMHKF
EVMGDRKKAKDRLIKEIHKKAKERMVCPHCGAPQFPIKFERPTIYWELRKDEEGNEYRHR
MMPSEVRDRLEKIPDKDLPLLGLHPEKARPEWMVLTVLPVPPVTMRPSITLESGIRAEDD
LTHKLVDIIRINNRLKSNIEAGAPQLIIEDLWDLLQYHVTTYINNETSGIPPAKHKSGRP
LKTLSQRLKGKEGRFRGNLSGKRVNFSARTVISPDPMISINEVGVPIAVAMELTVPEKVT
EFNFEKLKKMVLNGPEKYPGANYVIDPEGRRIRLMENNLEIIAERLDLGWTVERHLLDGD
IVLFNRQPSLHRMSIMAHRVRVMPYRTFRLNLSVCPPYNADFDGDEMNLHVPQTEEAQAE
AKILMEVQNHIISPRYGGPLIAGIQDHISGGYLLTREGAYFTRSEVEQMLMFAGINVDKL
PEPDKVENGVELWSGKTIFSLLLPDDLTIWYRNKLCDEPERCEALEKLIEEKLVPDPEEV
RKLAYDGFTYIQNGKLLSGAIDKKAYGREDGKLLDIIVREYGVERARQFLDQVTKLAIWV
ITHKGFTTAIDDEDLPREALDRIHEIIREAEERVERLIEAYKNGELEPLPGKTLEETLES
NIMAVLAEARDNAGKVAEKYLGMGNHAVIMAKTGARGKMLNITQMAAMLGQQSIRGKRLY
RGYRGRVLTHFKPGDLGARARGFVTNSYKSGLTPQEYFFHAMGGREGLVDTAVRTAQSGY
MQRRLINALQDLKVDYDGTVRDPTGIIVQFKYGEDGIDPMKSWQGKTVDVDRVIVRTLIK
MRGGE
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgatgaagaaggtcatcgggagtatcgagttcggaatcctctcacctcaggaa
atcagaaagatgagcgcggccgagatcaccgtccccgacacctacgacgacgacggctac
ccgatagaaggtggcctgatggacaagaggctcggcgtggtggacccgggtctcaggtgt
gagacctgcggtgccagggctggagagtgcccgggccacttcggccacgtcgagctcgcc
agaccgataatccacgttggcttcgccaagaccattcaccgcgttctggagagcacatgc
agggagtgcggaaggataaagctcaccgacgaggagatagaagagtacatgcacaagttc
gaggtcatgggcgacaggaagaaggccaaggacaggctcatcaaggagatacacaagaag
gccaaggagagaatggtctgcccgcactgtggagcgccacagttcccgatcaagttcgag
aggcccaccatctactgggagctcaggaaggacgaagaaggtaacgagtacaggcacaga
atgatgccgagcgaggttcgtgacaggcttgagaagatacccgacaaggacctgccactc
ctcggactccaccccgagaaggccaggccggagtggatggttctcaccgtcctgccggtt
ccgcccgttaccatgaggccatcaatcaccctcgagagcggtatccgcgccgaggacgac
ctcacccacaagctggtcgatattatccgtatcaacaaccgcctcaagtccaacatcgag
gccggtgcgccccagctcatcatcgaggacctctgggacctcctacagtaccacgttacc
acctacatcaacaacgagacctcaggcattccgccggccaagcacaagagcgggaggccc
ctcaagaccctctcccagcgtttgaagggcaaggaaggccgcttccgtggaaacctcagc
ggtaagcgcgtgaacttctcagcccgtacggtcatcagtccggatccgatgataagcatc
aacgaggtcggcgttcccatagcggtcgcaatggagctgaccgttcctgagaaagtgacc
gagttcaacttcgagaagctcaagaagatggtcctcaacgggcccgagaagtaccccggc
gccaactacgtcatagacccggagggaagaaggatacgcctcatggagaacaacctcgag
ataatagccgagaggctcgacctcggctggacggtcgagaggcatctcctcgacggcgac
atagtgctgttcaacaggcagccctcgctccacagaatgagcataatggcccaccgcgtc
cgcgttatgccctacagaaccttccgcctcaacctctccgtctgcccgccctacaacgcc
gacttcgacggtgacgagatgaacctccacgttccgcagacggaggaggctcaggcagag
gcgaagatactcatggaagtccagaaccacatcatctcgcctcgctacggcggcccgctc
atagctggaatccaggaccacatctccggtggctacctgctcacccgcgagggagcatac
ttcacccgctcagaggtcgagcagatgctcatgttcgcgggaattaacgtggacaagctt
ccagagccggacaaggttgagaacggcgttgaactgtggagcggaaagacgatattctcg
ctcctcctgccggacgacctcacgatctggtaccgcaacaagctctgcgacgagccggag
cgctgtgaggcccttgagaagctcatcgaggagaagctcgttcctgacccagaggaggtc
aggaagctcgcctacgacggcttcacctacattcagaacggaaagctcctcagcggtgcc
atagacaagaaggcctacggcagggaggacggaaagctgctcgacatcatcgtgagggag
tacggcgtcgagagggccaggcagttcctcgaccaggtgaccaagctggccatatgggtc
ataacccacaagggcttcacgaccgcgatagacgacgaggacctgccgagggaggccctt
gacagaatacacgagataatccgcgaggccgaggagagggtggagaggctcattgaagcc
tacaagaacggcgagcttgagcccctaccgggcaagaccctcgaggagaccctcgagagc
aacatcatggcggttttagccgaggcgcgtgacaacgccggtaaggtcgctgaaaagtac
ctcggtatgggcaaccacgcggtcatcatggccaagaccggagcgaggggtaagatgctc
aacatcacccagatggcggcgatgcttggccagcagtccattcgtggaaagcgcctctac
cgtggctaccgcggaagggttctgacacacttcaagcccggcgaccttggagccagggcc
aggggattcgtcaccaactcctacaagagcggtctaacgccccaggaatacttcttccac
gccatgggtggtagggaaggactggttgacacggccgtcaggacggcccagagcggttac
atgcagcgccgtctgataaacgcgctccaggacctcaaggtggactacgacggaaccgtc
agagacccaaccggaatcatcgttcagttcaagtacggtgaggacggaatagacccgatg
aagagctggcagggtaagacagtcgatgtggacagggtcatcgttaggaccctcatcaag
atgaggggaggtgagtga
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