Thermococcus cleftensis: CL1_0442
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Entry
CL1_0442 CDS
T02169
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
thm
Thermococcus cleftensis
Pathway
thm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
thm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CL1_0442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thm03021
]
CL1_0442
Enzymes [BR:
thm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CL1_0442
Transcription machinery [BR:
thm03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
CL1_0442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
SMC_ScpA
Motif
Other DBs
NCBI-ProteinID:
AFL94651
UniProt:
I3ZSG7
LinkDB
All DBs
Position
412484..413659
Genome browser
AA seq
391 aa
AA seq
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MVAAKTIRSLVDKADLPENLKEELYEKLVRYNEKYKLKKAEIEAIIEETVKEYQRALIEP
GEAIGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTLGLPRIIEIVDARKNPSTPIMTVYL
DEKHRHDREKALEVARRIEGTTLENLARETSIDILNYEFIVDIDPERLEKAGLDMERIQR
KLESSFKSAEFEIDGYTLIMRPKKVGKLSDLRRLAEKVKKHRLKGLSGVGKTIIRKEGDE
YVIYTEGSNFKQVLKVPGVDPTRTRTNNIWEIAEVLGIEAARNAIIEEIVNTMREQGLEV
DVRHIMLVADMMTLDGVILPIGRHGIVGEKASVLARAAFEITTQHLFEAAERGEVDPLNG
VVENVLIGQPVPVGTGMVKLAMNLPLRPKRE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcagcgaagaccatcaggagcctcgttgacaaggctgacctcccggagaacctc
aaggaggaactctacgagaagctcgtcaggtacaatgagaagtacaagctcaagaaggcc
gagatagaggcaataatcgaggagaccgtgaaggagtaccagagggccctcatcgagccg
ggagaggccataggaaccgtcgcggcgcagtccataggtgagccctcaacccagatgacc
cttaacaccttccactatgcaggtgtcgcggaaatcaacgtcaccctaggtctgccaagg
atcatcgagattgtcgatgccaggaagaacccctcaacacccatcatgaccgtctacctc
gacgagaagcaccggcacgacagggagaaggccctcgaggtggcgaggaggatagaggga
accaccctcgagaacctcgcccgcgagacgagcatagacatactcaactacgagttcata
gtggacatcgacccggagaggcttgaaaaggccggcctcgacatggagaggattcagagg
aagcttgaaagctccttcaagagcgctgagttcgagatcgatggatacacgctcattatg
aggcccaagaaggtcggaaagctctccgacctgaggaggctcgccgaaaaggttaaaaag
caccgccttaaaggcctgtcgggcgtcgggaagaccatcataagaaaggaaggcgacgag
tacgtcatctacaccgagggctcgaacttcaagcaggtgctgaaggttccgggcgttgat
ccaaccaggacgaggaccaacaacatctgggaaatagcggaggtgctaggcatagaggcc
gccagaaacgccatcatcgaggaaatagtgaacacgatgcgcgagcagggtctcgaggtg
gacgtcaggcacatcatgctcgtcgccgatatgatgacgctcgatggagtcatactgccc
ataggcaggcacggaatagttggggagaaggccagcgtgcttgccagggccgctttcgag
atcacaacccagcacctcttcgaggccgccgagaggggcgaggtcgatcccctcaacggt
gtggtcgagaacgtgctgatagggcagccggttccagtcggaaccggaatggtcaaactg
gcgatgaatctccccctgagaccgaaaagggagtag
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