Thermococcus cleftensis: CL1_1060
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Entry
CL1_1060 CDS
T02169
Name
(GenBank) DNA polymerase II large subunit
KO
K02322
DNA polymerase II large subunit [EC:
2.7.7.7
]
Organism
thm
Thermococcus cleftensis
Pathway
thm03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
thm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CL1_1060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thm03032
]
CL1_1060
Enzymes [BR:
thm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CL1_1060
DNA replication proteins [BR:
thm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
CL1_1060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolC_DP2_cat
PolC_DP2_central
PolC_DP2_N
zf-DPOE
HypA
DUF7129
Zn_ribbon_6
DUF1272
SlmA-like_C
TackOD1
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
AFL95263
UniProt:
I3ZU79
LinkDB
All DBs
Position
1023771..1027670
Genome browser
AA seq
1299 aa
AA seq
DB search
MGEELYSPEMKAYFESLQREIDRAYEVARKARAQGKDPSLEVEVPQATDMAGRVESLVGP
PGVAERIRELVREYGKELAALKVVDEIIDGKFGDLGSKEKYAEQAVRTALAILTEGIVSA
PLEGIADVKIKRNEWEDNSEYLALYYAGPIRSSGGTAQALSVLVGDYVRKKLGLDRFKPS
EKHIERMVEEIDLYHRAVTRLQYHPEADEVRLAMRNIPIEITGEETDKVEVSHRDVPGVE
TNHLRGGAILVLAEGVLQKAKKLVKYIDKMGVDGWDWIKEFVEAKEKGKKAEDSKPGESK
AEDFGAREEVAEKVEKGFYYELYERFRANIAPNKKYTKEIIGGRPLFAEPSTNGGFRLRY
GRSRVSGFATWSVNPATMLILDEFIAIGTQMKTERPGKGCIVTPATTVEGPIVKLRDGSV
VRVDDYQTALRIRDKIEEILYVGDALVNFGDFVENNQTLLPANYAEEWWVQEFVKAIAET
YEVELKPFSDNPREAIEEAAEYIELDPDFLEKLLKDPLRVRPSVEEAVHISKVLDVPLHP
YYTLYWNTLEPEEVEELQRALVGAQIEWDEFRKLKFARKVVLDSDPKIKRHLELLGLPHR
LERTEDRKKVIVIDYPWSAALLTPLGNLEWEFEAKPLFTVIDIINENNGIKLRDRGISWI
GARMGRPEKAKERKMKPPVQVLFPIGLAGGSSRDIKKAAEEGKVTSVEIAFFKCPECGHT
GPEHICPRCGTRKELLWHCAKCNVDYSQGEAENFDFRCPKCGTELKPYARRTIKPSELLR
AAMENVKVYGIDRLKGVQGMTSGFKMAEPLEKGLLRAKNDVYVFKDGTIRFDATDAPITH
FKPREIGTSVEKLRELGYTHDFEGKPLERDDQILELKVQDVILPYEAGKYLLKVARFIDD
LLEKFYGLPRFYNAEKMEDLVGHLVIGLAPHTSAGIIGRIIGFSDVLVGYAHPYYHAAKR
RNCDGDEDAVMLLLDALLNFSKYYLPEKRGGKMDAPLVVTTRLDPREVDSEVHNMDVVRY
YPLEFYSATYEMKSPKEIKFIERVEDRLGKPEMYEGIKFTHDTDDIGLGPKMSLYKQLGD
MVEKVERQLALAERIRAVDEHHVAETIINSHLVPDLRGNLRSFTRQEFRCVKCNTKYRRP
PLAGKCPKCGGKIVLTVSKGAIEKYLPTAKMLVTKYNVLDYTRQRICLTEKDIKSLFENV
FPERQRTLMGFSADVCEKMIKERTGKSNGRNGYLDELKANGKLKKKAEKSKAGTKTEKKS
KKADKKTKPSEGLEKAVRKEKSKMKKPKKGISLDEFFGS
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgggggaggagctgtactcacctgaaatgaaggcctacttcgaatccctccagcgcgag
attgacagggcctacgaggttgcgagaaaggcccgcgctcagggaaaagacccgagcctt
gaagttgaagtgccccaggccacggacatggccggccgtgtggaaagccttgtgggccca
ccgggcgttgccgagagaataagagagctagtcagggagtacggtaaggagctggccgcg
ttaaaggtggtagatgaaatcatcgatggcaagttcggcgatttgggaagcaaggagaaa
tacgcggagcaggctgtaagaaccgctcttgccattctcaccgagggcatcgtctcggcc
ccccttgagggaatagcagacgttaagatcaagcgcaacgagtgggaggacaacagcgag
tacttggcgctctactacgcgggaccgataaggagctccggcgggacggcccaggcttta
agcgttctcgtcggcgactacgtgaggaagaagctcggcctcgaccgcttcaagcccagc
gagaagcacatagagagaatggtcgaggagatagatctctaccaccgcgccgtcacgcgc
ctgcagtaccaccctgaggccgacgaggtaaggcttgccatgaggaacattcccatcgag
ataaccggcgaagaaacggataaagtcgaggtttcccaccgtgacgttcccggcgttgaa
accaaccacctgcgcggtggagctattctcgttctggccgagggagttctccagaaggcg
aagaagctcgtcaagtacatagataagatgggtgtggacggctgggactggataaaggag
ttcgtcgaggccaaggagaagggcaagaaggcggaggattccaaacctggagaatccaag
gctgaggatttcggcgccagggaggaagttgccgaaaaagttgagaagggcttctactac
gagctctacgagcgctttagggccaacatagccccaaacaagaagtacacgaaggagata
atcggtgggaggccgctctttgccgagccatcaaccaacggcgggttcaggctcagatac
ggtcgctcccgcgtcagcgggttcgccacctggagcgtgaacccagcgacgatgctcatc
ctcgacgagttcatagcgataggcacccagatgaagacggagaggcccggaaagggctgc
atcgtaacccccgccaccaccgtcgagggaccgatagtaaagctcagggacgggagcgtg
gtgagggtagacgactaccaaacggccctcagaatcagggacaaaatcgaggagatactc
tacgttggcgatgcccttgtgaacttcggagacttcgtcgagaacaaccagacgctcctg
cctgccaactacgccgaggaatggtgggttcaggagttcgtcaaagccatagcggagacc
tacgaggtcgagcttaagcccttctccgacaacccgcgcgaggccatcgaggaggcggcg
gaatacattgagctcgacccagatttcctggagaagctcctcaaggaccccctccgcgtg
aggccgagcgtcgaggaggcggtgcacatctcaaaggttctcgacgttccccttcacccg
tactacaccctctactggaacacgctggagccggaggaggttgaggagctccagagggcc
cttgtgggtgcccaaatcgagtgggacgagttcagaaagctcaagttcgcgaggaaggta
gtcctcgacagcgatccaaagataaagcgccaccttgaactgctcggcctcccccacagg
cttgagcggaccgaggacaggaaaaaggtcatcgtgatagactacccctggagtgcagct
ctgctcacacccctgggcaacctcgagtgggagttcgaggccaagcccctcttcacggtc
atcgacatcatcaacgagaacaacgggatcaagctccgcgacaggggaatcagctggatc
ggcgctcgtatgggcaggccggagaaggccaaggagaggaagatgaagccgcctgttcag
gttctcttccccataggcctcgccggtggaagctcgcgcgacataaagaaggccgccgag
gaaggaaaggtaacgagcgtggagatagccttcttcaagtgcccggagtgcggccacacc
gggcctgagcacatctgcccgcgctgtgggacacggaaggagcttctctggcactgcgcc
aagtgcaacgttgattactcgcagggtgaggccgagaactttgacttccgctgtccgaag
tgcggaaccgagcttaagccatacgcgaggagaaccataaagccctccgagcttctccgc
gccgcgatggagaacgtcaaggtctacggcatcgacaggctcaagggcgtccagggtatg
acctctggctttaagatggcagaaccgcttgagaagggcctgctgagggccaaaaacgac
gtctacgtctttaaagatggaacgattcgcttcgacgccaccgatgcccccataacccac
ttcaagccgagggaaattggaacgagcgttgaaaaattgagggagctcggctacacccac
gacttcgagggcaagccccttgagcgggacgaccagatactcgagcttaaagtccaggac
gtcatactgccctacgaggcagggaaatatctcctcaaggtggctcgcttcatagacgac
ctccttgagaagttctacggcctgccgaggttctacaacgccgagaagatggaggatctc
gtcgggcacctcgttataggtttagccccacacacctcggccggaatcatcggcaggata
atcggcttttcggacgttctcgttggctacgctcacccgtactatcatgcagctaaaagg
cgcaactgtgacggcgacgaggacgctgtcatgctcctcctcgatgcactgctcaacttc
agcaagtactacctgcccgagaagcgcggcggcaagatggacgctccgctcgtcgttacc
acacgcctcgacccgcgcgaggtggacagtgaggtccacaacatggacgtggtccgctac
tatccccttgaattctacagcgccacctacgagatgaagtctccgaaggagattaagttc
atcgagcgcgttgaggacaggctcggcaaaccggagatgtacgagggcataaagttcacc
cacgatacggacgacatcggcctcggcccgaagatgagcctgtacaaacagctcggcgat
atggtggagaaggtggagcgccagctcgccctcgccgagcgcattcgcgcggtggacgag
caccacgttgccgaaacgataatcaactcccacctcgtcccggatttgaggggcaacctg
aggagcttcacccgtcaggagttcaggtgtgtgaaatgcaacacgaagtaccgcagaccg
ccgctggccggcaaatgcccgaagtgcggcggtaagatagtccttaccgtcagcaagggc
gccatagagaagtacctgccaacggccaagatgctcgtcacgaagtacaacgtgctcgac
tacacgaggcagaggatatgcctgaccgagaaggacataaagtccctcttcgagaacgtc
ttcccggagagacagaggacgcttatgggattctccgccgacgtatgcgagaagatgata
aaggagcggacgggcaaatccaacggtcggaacggctacctcgacgagctgaaggccaac
gggaagctcaagaaaaaggccgaaaagtcaaaggccgggacgaaaactgaaaagaagtcc
aaaaaagccgataagaaaacaaaaccctccgagggtctggaaaaggccgtcaggaaggag
aagtcaaagatgaaaaagcccaagaagggcatcagcctcgacgagttctttggctcctag
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