Thermococcus cleftensis: CL1_1310
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Entry
CL1_1310 CDS
T02169
Name
(GenBank) tRNA-splicing endonuclease subunit alpha
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
thm
Thermococcus cleftensis
Brite
KEGG Orthology (KO) [BR:
thm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thm03016
]
CL1_1310
Enzymes [BR:
thm01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CL1_1310
Transfer RNA biogenesis [BR:
thm03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
CL1_1310
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Sen15
Motif
Other DBs
NCBI-ProteinID:
AFL95509
UniProt:
I3ZUX5
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All DBs
Position
1264017..1264532
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AA seq
171 aa
AA seq
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MKEPIVFQLSGDRVFSEREKAINQFYNKRYFGEVVNGKLFLSLIEAAYLMEKGKIRVFDG
DRELSFRELVELGRKRDDQFDIKLLVYTDLRDRGYTVKSALKFGSHFRVYRRGMDEHSQW
LIWVVPENLRFSPNDITARVRVAHGVRKNMVMAVVDEDNDVVYYKIEWVKF
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggaacccatagtctttcagctcagtggcgacagggtcttcagcgagcgcgagaag
gcgataaaccagttctacaacaagcgctatttcggggaggtcgtgaacggaaagctcttt
ctctcgctcatagaggccgcctacctgatggagaaaggaaagataagggtcttcgacggt
gacagggaactctccttccgcgagctggttgagctcggcaggaagcgcgacgaccagttc
gacataaagctcctcgtttacaccgacctgcgcgacaggggctacacggtgaagtccgcc
ctcaagttcggctcccatttccgcgtttacaggcggggaatggacgagcactcccagtgg
ctgatatgggttgtcccggagaaccttcgcttcagtccaaacgacattaccgcccgcgtc
cgtgtcgcccacggcgtcaggaagaacatggtgatggcggtcgttgatgaggacaacgac
gtggtgtactacaagatcgagtgggtgaagttctaa
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