Thermococcus cleftensis: CL1_1411
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Entry
CL1_1411 CDS
T02169
Name
(GenBank) TATA-box binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
thm
Thermococcus cleftensis
Pathway
thm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
thm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CL1_1411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thm03000
]
CL1_1411
03021 Transcription machinery [BR:
thm03021
]
CL1_1411
Transcription factors [BR:
thm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
CL1_1411
Transcription machinery [BR:
thm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CL1_1411
RNA polymerase III system
TFIIIB
CL1_1411
RNA polymerase I system
SL1/TIF-1B
CL1_1411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Csa3_N
DUF2250
Motif
Other DBs
NCBI-ProteinID:
AFL95610
UniProt:
I3ZV76
LinkDB
All DBs
Position
1367911..1368474
Genome browser
AA seq
187 aa
AA seq
DB search
MSNVKLRIENIVASVDLFTQLNLEKVIEICPNSKYNPEEFPGIICRFEEPKVALLIFSSG
KLVVTGAKSVEDIERAVNKLIQMLKKIGAKFGRAPQIDIQNMVFSGDIGMEFNLDAVALS
LPNCEYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAKSEHDAWEAVRKLLRELEKYGL
IEEEEEW
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtaaagctcaggatcgagaacatcgtcgcttctgtggacttgttcacgcag
ctcaaccttgagaaggtcattgagatatgccccaactccaagtacaacccagaggagttc
cccggcataatctgccgcttcgaagagccaaaggttgccctcctgatattcagttcgggc
aagctcgtcgtcaccggcgccaagagcgtcgaggatattgagcgggccgtcaataagctc
attcaaatgctcaagaagataggggccaagttcggccgcgctccgcagatagacatacag
aacatggtcttcagcggcgacataggtatggagttcaacctcgatgccgttgctttgagc
cttcccaactgtgagtacgagcccgagcagttccccggcgttatctaccgcgtcaaggag
ccgagggcggtgatactgctcttctcctccggaaagatagtctgctccggagcgaagagc
gagcacgacgcatgggaggccgtcagaaagctcctccgcgagctggagaagtacggcctc
atcgaggaagaggaggagtggtga
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