Thermococcus cleftensis: CL1_1568
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Entry
CL1_1568 CDS
T02169
Name
(GenBank) cell division protein containing CDC48 domain 1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
thm
Thermococcus cleftensis
Pathway
thm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
thm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CL1_1568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thm03019
]
CL1_1568
03009 Ribosome biogenesis [BR:
thm03009
]
CL1_1568
04131 Membrane trafficking [BR:
thm04131
]
CL1_1568
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thm04147
]
CL1_1568
Messenger RNA biogenesis [BR:
thm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CL1_1568
Ribosome biogenesis [BR:
thm03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
CL1_1568
Membrane trafficking [BR:
thm04131
]
SNARE
SNARE associated proteins
Others
CL1_1568
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CL1_1568
Exosome [BR:
thm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CL1_1568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
AAA_16
RuvB_N
AAA_2
AAA_22
AAA_5
AAA_14
TIP49
AAA_33
nSTAND3
Vps4_C
AAA_28
RNA_helicase
AAA_24
NPHP3_N
IstB_IS21
ATPase_2
AAA_18
Mg_chelatase
Sigma54_activat
AAA_7
Bac_DnaA
DUF815
AAA_25
ABC_tran
Parvo_NS1
AAA_17
TsaE
AAA_3
NB-ARC
SLFN-g3_helicase
PhoH
ATPase
Zeta_toxin
Zot
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-ProteinID:
AFL95765
UniProt:
I3ZVN1
LinkDB
All DBs
Position
complement(1494220..1496607)
Genome browser
AA seq
795 aa
AA seq
DB search
MAEKREVKLKVASAYQRDVGRGIVRIDRKAMREIGVQSGDIIEIIGTKNTAAVVWPAYPE
DEGLGIIRMDGTIRKNAGVGLGDEVTVRRADVKEAKKVIVAPTEPIRFGHDFVEWFHSRL
VGRPVVRGDYIKIGILGQELTFVVTATTPAGIVQITEFTEFQVSEKPVKEVSKTAALGVT
YEDIGGLSDVIQKVREMIELPLKHPEIFEKLGIEPPKGVLLYGPPGTGKTLLAKAVANEA
NAHFIAINGPEIMSKYYGESEERLREVFKEAEENAPAIIFIDEIDAIAPKREETHGEVEK
RVVSQLLTLMDGLKSRGKVIVIGATNRPDAIDPALRRPGRFDRELEVGVPDKQGRKEILQ
IHTRGMPIEPEFRKGRVIEILEELERNDAYRESAERALMKVKDAKEEEIPEILRGIDEKL
YDEVKARLIDALLEELAEVTHGFVGADLAALAREAAMAALRRLIKEGKIDFEAEHIPKEV
LEDLKVTRKDFYEALKMVEPSALREVLLEVPNVRWEDIGGLEDVKEELREAVEWPLKYPE
AFLGLGITPPKGILLYGPPGTGKTLLAKAVANESEANFIAIKGPEVLSKWVGESEKNIRE
IFRKARQAAPTVIFIDEIDAIAPRRGTDVNRVTDRLINQLLTEMDGIQENSGVVVIGATN
RPDIIDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRNVPLAEDVKLEELAKRTEGYTG
ADIEAVVREAAMLAMRRALQKGIIRPGMRADEIRAKVKVTMKDFEEAMKKIGPSVSEETM
EYYRRVQEQFKQARG
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaagagagaggtcaagctcaaggtcgcctctgcttaccagagggacgttggg
aggggaatagttaggatagaccgcaaggcgatgcgcgagataggcgtccagagcggtgac
ataatcgagatcatcggaaccaagaacacggccgcggtggtgtggccggcctaccccgag
gacgaaggactcggcataatcagaatggacggaaccataaggaagaacgccggcgttggc
ctcggtgacgaggtgaccgtcaggagggccgacgtcaaggaggcgaagaaggtcatagtc
gccccgaccgagccgatccgcttcgggcacgacttcgtcgagtggttccacagcaggctc
gtcgggaggcccgtggtcaggggagactacatcaagatcggaatcctcggccaggagctg
accttcgtggtcaccgcaacgactccggcagggatagtccagataaccgagttcaccgag
ttccaggtgagcgagaagcccgtcaaggaggtgtcaaagaccgcagccctcggcgtcacc
tacgaggacatcggtggactgagcgacgtcattcagaaggtcagggagatgatagagctt
ccgctcaagcacccggagatattcgagaagctcggcattgagccaccgaagggagttctc
ctctacggcccgccgggaaccggtaagaccctcctcgccaaggccgttgcaaacgaggcc
aacgcccacttcatagccatcaacgggccggagataatgagcaagtactacggtgagagc
gaggagcgcctgagggaggtcttcaaggaggccgaggagaacgccccggcgataatcttc
atcgatgagatagacgcgattgctccgaagagggaagaaacccacggtgaggtcgagaag
agggttgtgagccagctgctcacgctcatggacggcctgaagagcaggggcaaggtcata
gtcataggcgccaccaacaggcccgacgccatcgacccggccctcaggaggccaggaagg
ttcgaccgcgagctcgaagtcggcgttccggacaagcagggcaggaaggagatactccag
atacacacgaggggaatgcccatcgagccggagttcaggaagggcagggtcatcgagata
ctcgaggagcttgagaggaacgacgcctaccgcgagagcgccgagagggcactcatgaag
gtcaaggacgccaaggaggaggagattcccgagatactcaggggcatagatgagaagctc
tacgacgaggtcaaggccaggctcatcgatgctctccttgaggaactggcagaggtcacg
cacggcttcgtcggtgccgacctcgcggcgctggcaagggaggcagccatggcggcgctc
aggaggctcatcaaggagggcaagattgacttcgaggccgagcacatacccaaggaggtc
cttgaggatctcaaggtcacgaggaaggacttctacgaggccctcaagatggtcgagccg
tcggcgctgagagaggtgctcctcgaggttccgaacgtccgctgggaggacataggcggc
ctggaggacgtcaaggaggagcttcgtgaagccgtcgagtggccgctcaagtatccggag
gccttccttgggctcggcataaccccgccgaagggaatactcctctacggcccgccggga
accggtaagaccctcctcgcgaaggcagttgccaacgagagcgaggccaacttcatcgcc
atcaaaggcccagaggtgctgagcaagtgggtcggcgagagcgagaagaacatcagggag
atattcaggaaggcccggcaggcggctccgacggtgatattcatcgacgagatcgacgcg
atagccccgaggaggggaaccgacgtcaaccgcgtcaccgacaggctcatcaaccagctc
ctcaccgagatggacggaatccaggagaacagcggagtggttgttataggcgccaccaac
aggccggacatcatcgacccggccctgctcagacctggaaggttcgacaggctcatactc
gtgccggcgccggacgagaaggccaggctggagatattcaaggtccacaccaggaacgtg
ccgctcgccgaggacgtcaagctcgaggagctggcgaagaggaccgagggctacacggga
gccgacatcgaggcggttgtgagagaggccgcgatgctcgccatgcgcagagcgctccag
aagggcatcataaggcccggcatgagggcggacgagataagggccaaggtcaaggtcacg
atgaaggacttcgaggaggccatgaagaagataggccccagcgtgagcgaggagaccatg
gagtactacagaagggtccaggagcagttcaagcaggcccgcgggtga
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