Thermococcus cleftensis: CL1_1584
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Entry
CL1_1584 CDS
T02169
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
thm
Thermococcus cleftensis
Pathway
thm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
thm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CL1_1584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thm03021
]
CL1_1584
Transcription machinery [BR:
thm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
CL1_1584
Prokaryotic type
Archaeal type
TFB
CL1_1584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
Zn_Ribbon_Prim
HTH_Tnp_ISL3
Sigma70_r4
HTH_AsnC-type
RB_B
RUBY_RBDX
Zn_ribbon_IS1595
HTH_11
ADK_lid
FtrD-like
FYDLN_acid
Trm112p
Auto_anti-p27
Zn_ribbon_tTFIIB
Cys_rich_CPCC
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
AFL95781
UniProt:
I3ZVP7
LinkDB
All DBs
Position
1504933..1505832
Genome browser
AA seq
299 aa
AA seq
DB search
MSNRRVCPVCGSTEFIYDPGRGEIICKVCGYVIEENVVDMGPEWRAFDASQREKRARVGA
PESILLHDKGLSTDIGIDRNLSGLMREKMYRLRKWQSRLRVSDAAERNLAFALSELDRIA
SQLKLPRHVEEEAARLYREAVRKGLIRGRSIESVIAACVYASCRLLKVPRTLDEIADISR
VDKKEIGRSFRFIARNLNLTPKKLFVKPTDYVNKFADELGLSERVRRRAIAILEEAYEKG
LTSGKSPAGLVAAALYIAGLLEDEKRTQREVAEVARVTEVTVRNRYKELVDKLNLKIPV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaatcgtagggtttgcccggtctgcggctcgacggagttcatctacgatccgggt
aggggcgagataatctgtaaggtctgcgggtacgttatagaggagaacgtcgttgatatg
gggccggagtggcgcgcatttgacgcgagccagagggaaaagagggcccgtgttggcgcc
cccgagagcattcttcttcacgataagggcctttcaaccgacattggaatcgacaggaat
ctctccgggctgatgcgtgagaagatgtacaggctcaggaagtggcagagcaggctcagg
gtgagcgatgccgccgagcgtaacctcgcctttgccctcagcgagctggatagaatagcg
agccagctcaagctcccgaggcatgtggaggaggaagcggcaaggctctaccgtgaagcc
gtcaggaaaggcctgataaggggccgctcgattgagagcgttatagcggcctgcgtctac
gcctcctgcaggctcttgaaggttcccaggacgctcgacgagatagccgacatctcccgc
gttgacaagaaggagataggcaggagcttccgctttatcgcgaggaacctcaacctcacg
ccgaagaagctcttcgtcaagccgaccgactacgtgaacaagttcgcggacgagctgggc
ctgagtgagagggtgaggagaagggccatcgcgatactcgaggaggcctacgagaagggc
ctcaccagcggaaagagtcctgcaggtttggttgccgcggcgctctacatagccggtctc
ctggaggacgagaagaggacccagcgcgaggtggccgaggtggcgcgcgtcaccgaggtc
accgtcaggaacagatacaaggagctagtggacaagctcaacctgaagataccggtttga
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