Thermococcus cleftensis: CL1_1649
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Entry
CL1_1649 CDS
T02169
Name
(GenBank) putative Rad3-related DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
thm
Thermococcus cleftensis
Pathway
thm03022
Basal transcription factors
thm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CL1_1649
09124 Replication and repair
03420 Nucleotide excision repair
CL1_1649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thm03021
]
CL1_1649
03036 Chromosome and associated proteins [BR:
thm03036
]
CL1_1649
03400 DNA repair and recombination proteins [BR:
thm03400
]
CL1_1649
Enzymes [BR:
thm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CL1_1649
Transcription machinery [BR:
thm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CL1_1649
Chromosome and associated proteins [BR:
thm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CL1_1649
DNA repair and recombination proteins [BR:
thm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CL1_1649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
ResIII
DEAD
AAA_30
SNF2-rel_dom
AAA_19
AAA_11
HerA_C
IstB_IS21
Antimicrobial17
Med7
Motif
Other DBs
NCBI-ProteinID:
AFL95846
UniProt:
I3ZVW2
LinkDB
All DBs
Position
complement(1565041..1566999)
Genome browser
AA seq
652 aa
AA seq
DB search
MSDTSEQFEYFPYESLRPNQREFIELVAETVRNGENAIIEAPTGFGKTVSVLAGILPQAK
EMGYKVLYLARTHRQMDRVIEELKVINRKAKVSGVELRSRKELCLHTYLTQFTSDAYTAM
VVCKNLKKLGKCEFYENEKKKKAEFDELVNFFLDEPSHPVEILSYAETLELCPYDLTKRM
AEKADVIVASYLYLLSPSIRENFISSLDVDYSDLIVVFDEAHNLPDQAISALSDRISINT
VNRAIKEADEYNEHEIANFLSIFGRGLEILFQEKLASRDVQETPVQPELVFSHVVDVLGL
DTRWLVKTLNDMVAVGDAIREDRIEKGKPPRSYIGRVGEFLLLWLSLIGREDYLFLLSRE
RGLSLELVALDPSKALGFLREVQSAIFMSGTLTPLEAFRDVMGIERARLKKFPRMVKREN
AQVLVAKDVSTRGEERSIQVYRKMVDYIVEAAKLIPRNVGVFAASYEVLQGLLSANLQVR
LEETGKAVFIEKQGASSAENDAMVASFKAHAKGNGAVLLGVMGGRNSEGQDYSGDEMNGV
ILVGIPYARPTPRVQAQVRYFERKFPDKGRYYGYYLPAHRKLVQAAGRVHRSAEEKGSII
ILDYRVLWRGIRKDLPDWIVETMRPVDLARMRLYLRRFWSGGERFKKTLREV
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataccagcgagcagttcgaatactttccctacgagagcctgaggcccaaccag
cgcgagttcattgagctggtagctgaaaccgtcaggaacggagagaacgccataatcgaa
gcccccacgggcttcggaaagacagtaagcgttctggcgggaatactgccccaagcgaag
gagatgggatacaaggttctctacctcgcgagaacccacaggcagatggatagagttata
gaggagctgaaggtcataaaccggaaggccaaggtttccggcgttgagctgaggagcagg
aaggagttgtgcctccacacctacctcacccagttcacgagcgacgcctacacggccatg
gtcgtctgcaagaacctcaaaaagctcgggaagtgcgagttctacgagaacgagaagaag
aaaaaggccgagttcgacgagctggtgaacttcttcctcgacgagccgagccacccagtg
gagatcctgagctacgcggaaactctcgagctgtgcccctacgatctgaccaagagaatg
gcggagaaggccgacgtgatagtggccagctacctctaccttctcagtccttcgataagg
gagaacttcataagctcgctcgacgtcgattactctgacctcatagtggtcttcgacgag
gcccacaacctaccggatcaggccatctccgcccttagcgacaggataagcatcaacacc
gtgaacagggcaataaaggaggccgacgagtacaacgagcacgagatagccaacttcctc
agcatctttggcaggggacttgagattctcttccaggagaagctcgcgagcagggacgtc
caggagacaccagttcagcccgagctggtcttctctcacgtcgtagatgtgctaggcctg
gacacgaggtggctcgtcaagaccctcaacgacatggtggccgttggcgacgcgataagg
gaggacaggatagagaagggcaagcccccaaggagctacatcggccgcgttggagagttc
ctcctcctgtggctctcgctcataggtagggaagattacctcttcctcctcagcagggaa
cgggggctgagcctcgagcttgtggccctggacccctccaaggcgctgggattcctgagg
gaagttcagagcgcgatattcatgtccggaacgctcaccccgctcgaagctttccgcgac
gtgatgggcatcgagagggcaaggttgaagaagttcccgagaatggtaaagcgggagaac
gctcaggtcttggtggctaaagacgtctcaacgcgcggtgaggagcgctccattcaggtt
tacaggaagatggtggactacatagtcgaagcggcaaagcttatccccaggaacgtcggc
gttttcgcggcatcttacgaggtcctccagggcctgctctcggccaacctccaagtcagg
cttgaggaaaccggaaaagccgtgttcatcgaaaagcagggagccagctcggcggagaac
gacgcgatggtggcgagctttaaggcccacgccaagggcaacggcgcggttctgctcggc
gtcatgggcggcaggaacagcgaggggcaggactacagtggtgatgagatgaatggggtc
atactcgttggaattccctacgcgaggccgacccctagggttcaggcccaggtaaggtac
ttcgagcggaagttccccgataaggggcgctactacgggtattacttgcctgcccaccgg
aagctcgtccaggccgcggggagggtgcatcgctcggcagaggagaaggggagcataata
atactcgactaccgcgtcctctggaggggaataagaaaggacctgcccgactggatcgtc
gagacgatgaggcccgtcgatctggccagaatgaggctctacctaaggaggttctggtca
gggggcgaaagatttaaaaagaccctgcgggaggtatag
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