Thermosynechococcus sp. NK55: NK55_00500
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Entry
NK55_00500 CDS
T02977
Name
(GenBank) UvrD/REP helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thn
Thermosynechococcus sp. NK55
Pathway
thn03420
Nucleotide excision repair
thn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NK55_00500
03430 Mismatch repair
NK55_00500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thn03400
]
NK55_00500
Enzymes [BR:
thn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NK55_00500
DNA repair and recombination proteins [BR:
thn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NK55_00500
MMR (mismatch excision repair)
Other MMR factors
NK55_00500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AHB87488
UniProt:
V5V291
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All DBs
Position
103898..106216
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AA seq
772 aa
AA seq
DB search
MNLLPLSPTVTHLLGTLRPGQREISEWQGGMLAVAAVPGAGKSHGMAVGAAIAIAREKLH
QQRQLVVVTYSRSAAANIKVRIRKYLREMGLPRNGFSVQTLHSLALKIATSHPTAGLRLR
GENLMSEHEQRRLCVTCVKEWARSHPDILEQLIRGCDTSPLSDVEHDGRKSALLTDILVK
LAQTVIGSARSMALMPHDLRQLSQQLCSQGAAEAGPYPFLEIGADLLELYQNHLAQRGQI
DYDEMILAAVQLLEGDRQYRHEWQQRVYAVFEDEAQDSTPLQSRLLRLLAEDPTTGQVHF
VRVGDPNQAINSTFTAADPLFFNEFCNECAQKGAFYEMTQAGRSTPLIIRVANYLVRWAN
WALKDQEPPFRDQAIQCVSPPSLEPGANPPPWGQGVEIVRPPTVVETVKHLAQRISQVLA
AHPEASVAVLVRTNRQAEFVADVLRSPTDFNLDIDLWAQGIPLLDVAGIERRSQVPKELL
DILYFLHCPYSPAAVKAALTVLQERKRIPPQNLDRLAAQPEVFLYPGPLDPPAEEPVLKA
RQHCQRLLKARLELSLFPLITYCAQELGYDAAELATADRLIWELTQQEPTQLWERIYPRW
QELVAADRFQAVEMEDLHSRLVRSGQVTIMTMHRAKGLDWDAVFVPFLEETTLPGKSWVA
ANAKFLSSDVDFIDVVRSQLRAYGHNQPLPNWQTAYKKATAAKTAEEYRLLYVAMTRAKR
LLWLAAAQQAPFHWQNFNWRGFYQLQDSPPCPFIEDLQRKLKAHAAATPGDR
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgttgccactctcccccacggtgactcacctcctagggacactacgtccgggt
caacgggaaatcagtgaatggcaagggggaatgctggccgtcgcggcagtgccgggagcg
ggcaaatcccacggcatggcggtaggggcagcgatcgccatcgctcgggaaaagctccat
caacagcggcaactggtggtagtcacctacagtcgttcggctgccgccaatatcaaggtg
cgcatccgcaagtacctacgggaaatggggctgccccgcaatggttttagtgtgcagacc
ctccacagtttggccttgaaaattgccaccagccaccccacagcgggtctgcgtttgagg
ggtgaaaacttaatgagtgagcatgagcagcgacgcctctgtgtcacctgtgtcaaggag
tgggcgcgatcgcaccccgatatcctcgagcaactcatccgaggctgcgataccagtccc
ctgagcgacgttgaacacgatggccgcaaaagtgcactgttgaccgacatcttggtgaag
ttggcgcagaccgttattggcagtgcccgcagtatggctttgatgccccatgatctgcgg
cagttgtcccagcagttgtgctcccaaggtgcagccgaagcaggaccctaccctttttta
gagattggtgccgaccttttggaactgtaccagaaccatctggcgcagcgggggcaaatt
gactacgatgaaatgattttggcagctgttcaactcctagagggcgatcgccagtaccgc
cacgaatggcaacagcgagtgtatgccgtctttgaggatgaagctcaagactcaaccccc
ctgcaatcgcggttactgcggcttttagccgaggaccccaccaccggacaagttcatttt
gtgcgggtgggggatccgaaccaagccattaactccacctttacggctgccgatccccta
tttttcaatgaattttgtaacgagtgtgcccagaagggggctttctatgaaatgacccaa
gcggggcgatccacccctttgatcattcgcgtcgctaactatttggtgcgatgggcgaat
tgggcactcaaagatcaagaaccccccttccgtgaccaagccattcagtgtgtgtcgccg
ccgagtttggaaccgggggccaacccacccccctggggacaaggggtagaaattgtccga
ccgccaacggttgttgagacggttaaacatctggcgcagcgcatttctcaggtgttggcg
gcgcatccagaggcttcagtggcggtgctggtgcgcactaaccgccaggctgaatttgtt
gccgatgtcttgcgatcgcccactgacttcaaccttgatattgacctttgggcgcaagga
attccgctgctggatgtggccggcatcgaacggcgatcgcaggtgcccaaggaattgctg
gacattctctactttctccactgtccctattctcccgcagcggtcaaggcagccctaacg
gtgcttcaggagcgcaaacgcattccaccccaaaatttggatcgcttggcagctcagcca
gaggtcttcctctaccccggtcctttagacccccctgccgaggaaccggtgctcaaggca
cgccaacactgccaacgcctcctcaaagcccgcctagagctgtctctatttcccttgatc
acctactgcgctcaggaattgggctatgacgccgctgaattggccactgccgatcgcctg
atctgggaattgacccagcaggaaccaacgcaactgtgggagcgtatctatccccgttgg
caagaattggtggcagcggatcgctttcaagcggtggagatggaagatctccatagccgc
ttagtgcgatcgggtcaggtgaccattatgacgatgcatcgcgccaagggtctggattgg
gatgcggtttttgtcccttttttagaggaaacaaccctccccggtaagagttgggttgct
gccaatgctaagttcctcagttctgacgtggattttatagacgtggtgcgatcgcaactg
cgggcctacggccataaccagccactgcccaactggcaaactgcctacaaaaaagccaca
gccgccaaaaccgccgaggaatatcgcctgctctacgtcgccatgacccgtgccaagcgc
ctcctgtggctagcggctgcccagcaagctccctttcactggcaaaactttaattggcga
gggttttatcaactgcaggacagtcccccttgtccttttatcgaagaccttcagagaaag
ttaaaggcccatgcagcagctactcccggcgatcgctaa
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