Thermosynechococcus sp. NK55: NK55_06075
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Entry
NK55_06075 CDS
T02977
Symbol
topA
Name
(GenBank) DNA topoisomerase I TopA
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
thn
Thermosynechococcus sp. NK55
Brite
KEGG Orthology (KO) [BR:
thn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thn03032
]
NK55_06075 (topA)
03400 DNA repair and recombination proteins [BR:
thn03400
]
NK55_06075 (topA)
Enzymes [BR:
thn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NK55_06075 (topA)
DNA replication proteins [BR:
thn03032
]
Prokaryotic type
DNA Topoisomerases
NK55_06075 (topA)
DNA repair and recombination proteins [BR:
thn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NK55_06075 (topA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AHB88521
UniProt:
V5V580
LinkDB
All DBs
Position
complement(1286494..1289157)
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AA seq
887 aa
AA seq
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MSTLVIVESPTKARTIRKFLPPDYRVEASMGHVRDLPRSAADVPPEFRGEEWATLGVNVA
AGFEPLYIVPKEKQKVVKELKTALKTADELLLATDEDREGESISWHLLQLLEPKVPVRRM
VFHEITEEAIQEALRNCRDVNQQLVRAQETRRILDRLVGYTLSPLLWRKIAPHLSAGRVQ
SVAVRLLVQRERERLAFRKGQFWDLKATLDQRGALFPARLVSVGGQRLATGHDFDPTTGQ
LRNPDAVLLLDEAAANALRDRLLTETWTVTEQEERQQTRKPAPPFTTSTLQQEANRKLHL
SARDTMRIAQKLYEEGYITYMRTDSVHLSDQAIAAARSCVEAMYGKAFLSPQPRQYTTKT
KGAQEAHEAIRPAGSQFRTPQETGLQDRELELYELIWKRTVASQMADAHITLLTVSITAG
DALFRAHGKRIDFPGFFRAYVEGSDDPEAALESQEVILPPLQVGEILRCHALESVGHETQ
PPPRYTEASLVKALEQAGIGRPSTYATILSTIQDREYAIRRGNALEPTFTAFAVTALLEK
YFPDLVDINFTARMEQTLDDISTGEVEWQPYLESFYLGENGLEQQVKERERTIEATEARA
IALPELNAEVVVGRFGPFVVYQNGNGSEPIKASLPQDATPGSLTREQVEQLIRQKLEGPD
KLGLHPETGEPIFLLTGRFGPYVQLGEATEANPKPKRASLPKGVSPDEVTLDLAITLLSL
PRTLGVHPETGKLIQANQGRFGPYIVHDPEGEKDYRSLKGEDDVYTITLERALELLATPK
SSRARAKKQVLAVLGTHPEDGEPVQILDGPYGPYVNHGKVNASLPEGVTPETMTLEQALL
LLAEKAPKKTRRSATTTAPKPKSTTKRTSKKTVAQTAKTSRRKSTET
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccttgtcatcgttgaatccccaacaaaagcccgtaccattcgcaaatttctg
ccgccggactatcgcgttgaagcctcaatgggtcatgtccgtgatctgccccgcagtgct
gctgatgtgccccccgaattcaggggggaagagtgggcaaccctaggggtgaatgtcgct
gctggctttgaacccctctacattgttcctaaagagaaacaaaaagttgtcaaagaatta
aaaactgccctcaaaaccgctgatgaactcctgctcgcgaccgatgaagaccgcgaagga
gaaagcattagttggcacctgctgcaactgttggagccaaaggtgccggtgcggcggatg
gtcttccatgaaattaccgaggaagcaatccaagaagcactacgcaattgccgcgatgtc
aatcaacaactggtgcgtgctcaagaaacgcggcgtatcctcgatcgcttggtgggctat
accctgtcgcccctgctgtggcggaaaattgccccccatctgtcagcggggcgggtgcag
tcagttgcagtgcgcctattggttcaacgggagcgagaacggttggccttccgtaagggg
caattttgggatctcaaggccaccttagatcaaaggggagccctttttccagcgcgtttg
gtgagtgttggcggtcaacgcttggccacgggccatgattttgatcccactacaggacag
ctacgtaaccctgatgctgtcttgctcttggatgaggcggctgccaacgctctgcgcgat
cgcctgctaacggaaacctggacggttaccgaacaagaggagcgccaacaaacccgcaaa
ccggctcccccctttaccacctcaaccctgcaacaggaggctaaccgcaaactgcacctc
tcggcgcgggatacgatgcgcattgcccaaaagctctacgaagagggctacatcacctat
atgcgtacggactcggtgcatctgtcggatcaggcgatcgccgccgcccgcagttgtgtg
gaagccatgtatggcaaagcctttttgtcgccccagccacgtcaatacaccaccaaaacc
aagggggcccaagaagcccacgaagcgattcgccctgcaggtagccagtttcgcactccc
caagaaaccggccttcaagatcgggaactggaactctacgaactgatctggaagcgcacg
gtggcctcccagatggctgatgcccatatcactctgctaacggtctcgattacggctggg
gatgccctcttccgtgcccacggtaaacgcattgattttccaggatttttccgggcctat
gtggaaggttccgatgatcccgaggccgccctcgaaagccaagaggtgatcctgcccccc
ctgcaagtcggagagattctccgctgtcacgccctggaaagtgtgggtcacgagacccag
ccgccgccgcgctacacggaagcaagcttggtcaaagccctcgagcaagcaggcattggt
cgtcccagcacctatgccacgatcctcagtaccatccaagaccgcgagtatgccattcgg
cgaggcaatgccctggaacccacctttacggcctttgcggtgacggcgctgctagagaaa
tacttccccgacttggtggatattaacttcacggcgcggatggagcaaaccctggatgat
atttccacaggggaggtggagtggcagccctaccttgaatccttctatctgggtgaaaat
ggccttgagcagcaggttaaagagcgggagcggacgattgaggcgactgaagcgcgggcg
atcgccctgccagaactgaatgctgaagtggtggtgggtcgctttggtccttttgtggtc
tatcaaaatggcaatggtagtgaacccattaaggcctccttgccccaagacgccaccccg
ggtagcctcacccgtgaacaggtggagcaattaattcgccaaaaactagagggtcccgac
aagctgggcctgcatcctgaaaccggcgaaccgatctttctgctgacggggcgctttggt
ccctatgtgcagttgggagaagccacagaggccaatccaaaacccaaacgagcttcccta
cccaagggcgtcagtcccgatgaagtcaccctagacttggcaattaccctgttgtcgctg
ccgcggacattgggggttcatcctgaaaccggtaaactcattcaagccaatcaaggtcgc
tttggcccctacattgtccacgatcccgagggtgaaaaagactatcgttccctcaagggg
gaagatgatgtgtacacgattaccctagagcgtgccctagagctgctggcaacacccaaa
tcgagtcgcgctcgggccaaaaaacaggtgctcgcggtgttggggactcacccggaggat
ggggaaccggtacagatcttggacggcccctatggcccctatgtcaaccacggtaaggtg
aatgcctccctgccggagggggtgacaccagagacaatgacccttgagcaagccctgctc
ctgttggcggaaaaagcaccaaagaaaacccgccgcagcgcaacaactactgcccccaaa
cccaaatcaacaaccaaaagaaccagtaaaaagacggttgcccagaccgcaaaaactagc
cgccgtaagtcaacggaaacctag
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