Thermosynechococcus sp. NK55: NK55_07125
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Entry
NK55_07125 CDS
T02977
Symbol
rfbB-2
Name
(GenBank) dTDP-glucose 4,6-dehydratase RfbB
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
thn
Thermosynechococcus sp. NK55
Pathway
thn00521
Streptomycin biosynthesis
thn00523
Polyketide sugar unit biosynthesis
thn00525
Acarbose and validamycin biosynthesis
thn00541
Biosynthesis of various nucleotide sugars
thn01100
Metabolic pathways
thn01110
Biosynthesis of secondary metabolites
thn01250
Biosynthesis of nucleotide sugars
Module
thn_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
thn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NK55_07125 (rfbB-2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NK55_07125 (rfbB-2)
01055 Biosynthesis of vancomycin group antibiotics
NK55_07125 (rfbB-2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NK55_07125 (rfbB-2)
00525 Acarbose and validamycin biosynthesis
NK55_07125 (rfbB-2)
Enzymes [BR:
thn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NK55_07125 (rfbB-2)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
AHB88719
UniProt:
V5V553
LinkDB
All DBs
Position
complement(1497105..1498184)
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AA seq
359 aa
AA seq
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MIKILVTGGGGFIGANFVRLALTEGWGAVLNLDKVTYACHPGTLAMLEQLPNYQFVRGDV
GDRPLVRDLLQTFQPAAVIHFAAESHVDRSINSPRDFIQTNIVGTANLLEEVKTYWQQLP
SGAQEAFRFIHISTDEVYGTLGPEDPPFREDTPYAPNSPYAASKAASDHLVRAYHHTYGL
PTLTTNCSNNYGPYQFPEKLIPLVICQALGGHPLPLYGDGQNVRDWLYVEDHCRAVYTVW
QKGQVGQTYNIGGNCEKPNLEVVQTLCDLLQTLVPRSGLNYRSLITFVSDRPGHDRRYAI
DATKIQRELGWQPQETFRSGLEKTVQWYLAHQDWVEAARTADYRAWLVTHYGSVLAHCP
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagattttggtaacaggtggcggcgggtttattggcgccaactttgtgcggctt
gccctcacggagggctggggggcggtgctcaaccttgataaagtgacctatgcctgtcac
cccggtaccctagccatgctggagcaactgcccaattatcaatttgtgaggggagatgtg
ggcgatcgcccccttgtccgggacctgttgcaaaccttccagcccgccgctgtcattcac
tttgcggctgagagccatgtcgatcgctccatcaatagtccgcgcgactttatccaaacc
aatattgtgggcacagctaatctcctagaagaagttaaaacctactggcaacagctcccc
tccggggcccaggaggcctttcgcttcattcacatttccaccgatgaagtctatggcact
cttggccccgaagatccgcctttccgagaagacaccccctatgcccccaacagcccctat
gctgcttcaaaggccgcctctgatcatctggtgcgtgcctaccaccacacctacgggcta
cccaccctcaccactaactgctccaacaactacggtccctaccaatttccagaaaaacta
atccccctagtgatctgccaagccttaggggggcaccccctgcccctttacggcgacgga
caaaatgtgcgcgattggctctacgttgaggatcactgccgtgcggtctataccgtttgg
caaaagggacaggtgggccaaacctacaacattggcggcaattgtgaaaagcctaacctt
gaggttgtgcaaaccctctgtgatctgctgcaaaccctggtaccccggtctggcttaaat
taccgcagtttgattacctttgtgagcgatcgccccggtcacgatcgccgctacgctatt
gatgccactaaaattcagcgggaactggggtggcagccccaagaaacctttaggagtggc
ctagaaaaaaccgtacagtggtatcttgcccaccaagattgggtggaagccgcccgcact
gctgattaccgggcttggctggtcactcactacggcagcgttctcgctcattgcccatga
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