Thermosynechococcus sp. NK55: NK55_07520
Help
Entry
NK55_07520 CDS
T02977
Symbol
sbcC-1
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
thn
Thermosynechococcus sp. NK55
Brite
KEGG Orthology (KO) [BR:
thn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thn03400
]
NK55_07520 (sbcC-1)
DNA repair and recombination proteins [BR:
thn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NK55_07520 (sbcC-1)
Archaeal homologous recombinant proteins
NK55_07520 (sbcC-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_27
SbcC_Walker_B
Rad50_zn_hook
AAA_15
AAA_21
AAA_29
Laminin_II
CCDC-167
ABC_tran
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AHB88795
UniProt:
V5V5Y4
LinkDB
All DBs
Position
1572040..1575051
Genome browser
AA seq
1003 aa
AA seq
DB search
MIPRQLVLRNFLSYRQATLSFAGLHLACICGANGAGKSSLLEAIAWALWGQSRASREDDV
IYYGEMEAQVTFEFSVQGQTYRVVRLRRRQQQTVLELQIQTALGYTSLTGRSLRATQEKI
IQILRLDYATFVNSAYLRQGRADEFMAKRPSERKQLLASLLGLDQYETLAEAARDRARDY
KAQISVLEQRLQTLADELAQEPRLRTQQAAVRQQIQQQRQQVQQCQQRLQEQQAAYHIHQ
LQQRDYEHLQQQRDTLAAAIAHLEHQCQTLRQEQAAIADLEARAPLLEAAVRQWESLKTA
EAQLQQCFSKYQQLRQERDRHQHSLDQQRQDLLRTLHGLESQQQFLLEQCQQLEKLLKQE
NQIIAAFEQLQRARAHLQAQEELQQKVFPLLQAKQRLELERQQQEQRLRSRRDELQQLWQ
HLHQQIERQPALQEAVTLITAQIATLEKQRIYQDHVREKGLERRRFLEQLQARQREYERQ
MNQLEQRLELLNQPGAICPLCQRPLDREHYQAVRQRHVAEKEELLNQVWVIREQLAVTER
EIQVLRREYLTVGYEISQLTQLFEQRGQLQQQLQSTQDLEPQLDRLAGEIQQVEEQLRNG
HQESLGELQAIEAELARLNYDEKNLAIARGQVEKWRWAEAKEQELRQAQRQYQQIQQQLP
NLMAQQEELQRQLNALETTSPLAQTLARIDQQLATLAYNPERHTQIQAQLAALATDYEAY
EALQRGRSRQPQLRQDLEHLAETLQQQQAQLQHITDKLATLEETARAASRLAADLHQQQQ
HLLKQQQTLEANLAQHGKLSAELEQLHRLRQEYEQGQQTLAHLRHQYRLYCELAQALGKN
GIPALLIETVLPHLEAETNHILGRLSNHQLHVQFITQRSRRRSGADTKPIETLDILIADC
QGTRPYESYSGGEAFRINFALRLALARLLAQRSGSDVQFLIIDEGFGTQDAQGCERLIAA
LNAIAPEFHCILAITHVPALKEAFQTRIEVTKVAGASQLSIIT
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgattccacgtcaactggtattgcgcaacttcctcagctatcgccaagccactctttcc
tttgcggggttacatctggcctgtatttgtggtgccaatggggcgggcaagtcttcgctc
cttgaggcgatcgcttgggcactctgggggcaaagccgcgctagccgtgaggatgatgtg
atctactacggcgaaatggaagcccaggtgacatttgagtttagcgtccaagggcagact
tatcgggtggtacggttgcggcgacggcagcaacagacggttttggagttgcagattcaa
acggcgctgggctatacctcgctaacggggcgatcgctacgagcgacccaggaaaaaatc
attcaaattcttcgccttgactacgccaccttcgtcaacagcgcctatttgcgccaagga
cgtgccgatgaatttatggccaagcgccccagtgagcgcaagcaactgctggccagcctt
ttgggcttggatcaatacgagaccctagcggaggcggcgcgggatcgcgcccgtgactac
aaagcccaaatcagtgttctggagcagcgactccagaccctcgcggatgaattggcccag
gagccccgcctgcgtacccaacaggcagcggtgcgccagcagatccaacagcaacggcag
caggtacagcagtgccaacaacgactccaagagcaacaggccgcctaccatatccatcaa
ctccaacagcgggactatgaacacttgcaacagcagcgcgatacgcttgcggcagcgatc
gcccacctggagcaccagtgccagacccttcgccaagaacaggccgctattgcggatttg
gaagcccgtgcccccctattggaagccgccgtcaggcaatgggagagcctgaaaaccgcc
gaagcgcaattgcagcagtgttttagtaagtatcaacagctgcgccaagagcgcgatcgc
caccagcatagcctcgaccaacagcggcaagaccttctgcgcaccctccatggattggag
agccagcagcaatttctgctggaacaatgccagcagttggaaaagttgctcaagcaagaa
aatcagattattgctgcttttgaacagctacagcgagcgcgcgctcacctccaagcccaa
gaagagctgcaacaaaaagtctttccgctcctgcaagccaaacagcgcctcgaactggaa
cggcaacagcaggaacaacgcctccgcagccggcgcgatgaattgcagcagttgtggcag
catctccatcaacagatagagcggcaacccgctctccaagaggcagtgaccctgattaca
gcacagattgcaacccttgaaaaacagcgtatctatcaagaccatgtgcgagaaaaggga
ctggagcgccgccgcttcctcgaacaactgcaagcccgccagcgggagtatgagcggcaa
atgaatcaactggagcagcgcttggaactactgaatcaaccgggagccatttgccccctg
tgtcaacgtcccctcgatcgcgagcactaccaggctgtccggcaacgccatgtcgccgaa
aaagaggaactgctgaatcaggtgtgggtcatccgcgagcaactggcagttaccgagcgc
gaaattcaagttttacggcgggaatatctaacggtgggctatgagatctcacaactgacg
caactgtttgagcagcgggggcaactccagcagcaactccagagcacccaagatttagaa
ccgcaactggatcgcctagccggggaaattcagcaggttgaggaacagctcaggaacggc
catcaggaaagccttggggaactgcaagcgattgaggcagaactggcacgcctgaactat
gacgagaaaaatctggcgatcgcccgcggccaagtggaaaaatggcgttgggccgaagcc
aaggaacaggaactccgccaagcgcaacggcaataccagcagattcagcagcaactgcca
aacctgatggcccaacaggaggaactgcaacggcagctcaatgcccttgaaaccacttcc
cctcttgcccagaccttggcaaggattgaccagcaattggccaccttagcctacaatcca
gagcgccatacccaaattcaggcccaactggctgccctcgcaacggactatgaggcctat
gaggccctgcaacgggggcgatcgcgccaaccccaactccgccaagacctcgagcaccta
gcggaaacgctgcagcaacaacaggcacaattgcaacacatcactgacaaactcgccacc
cttgaagaaaccgctcgcgccgctagccgcctggccgccgatctccatcaacagcaacag
cacctcctcaagcaacagcagaccctcgaggccaaccttgcccagcatggcaaactcagc
gccgaattagagcaactccatcgcctcagacaagaatacgaacagggacagcaaaccctt
gcccacctccgtcatcaataccgcctctactgcgagctagcccaagccttaggcaaaaat
ggtattcccgccctgcttattgaaaccgtcttgccccatctagaggcagaaaccaatcat
atcctcggtcgcctcagcaaccaccaactccatgtgcagttcattacccagcgcagccgc
cgtcgcagtggagccgacaccaagcccattgaaacccttgatattctcattgccgattgc
caagggacccgtccctacgaaagctattcggggggtgaagcttttcgcatcaattttgct
ttgcgcttagccttagcccgactcttggcccagcgatcggggagtgatgtccagtttctg
attattgatgagggattcggtacccaagatgcccagggttgtgaacggctgattgccgcc
ttgaacgcgatcgcccccgaatttcactgcattctcgccattacccatgttcctgccctc
aaggaagcctttcaaacccgcattgaggtcaccaaagtagcgggagcctcccaactgagc
atcatcacttaa
DBGET
integrated database retrieval system
