Thermosynechococcus sp. NK55: NK55_07930
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Entry
NK55_07930 CDS
T02977
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
thn
Thermosynechococcus sp. NK55
Brite
KEGG Orthology (KO) [BR:
thn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thn03032
]
NK55_07930
03036 Chromosome and associated proteins [BR:
thn03036
]
NK55_07930
03400 DNA repair and recombination proteins [BR:
thn03400
]
NK55_07930
DNA replication proteins [BR:
thn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NK55_07930
Chromosome and associated proteins [BR:
thn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NK55_07930
DNA repair and recombination proteins [BR:
thn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NK55_07930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
Ribosomal_S3_C
HU-CCDC81_bac_2
H2TH
Motif
Other DBs
NCBI-ProteinID:
AHB88868
UniProt:
V5V636
LinkDB
All DBs
Position
complement(1660218..1660544)
Genome browser
AA seq
108 aa
AA seq
DB search
MNKAELVDAVFNRAHSANNVTKKQVEAIISATVEEIMEAVAKGEKVTLVGFGAFEPRERK
AREGRNPKTKEKMQIPATTVPAFSAGKLFKEKVAPPAAAEPAAKGKKK
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagctgagctcgtggatgctgtgtttaatcgtgcccatagcgccaacaacgtc
accaaaaagcaagttgaggctattatctctgccaccgtggaggaaatcatggaggctgtg
gccaagggagaaaaagtaacactggtgggctttggtgcctttgaacctcgggagcgcaaa
gcccgtgaagggcgcaaccccaaaaccaaggaaaaaatgcaaatcccagcaactaccgtg
cccgccttttcagcagggaaactcttcaaagaaaaagttgcacctcctgcggctgcggaa
ccagcggccaagggcaagaaaaaatag
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