Thermosynechococcus sp. NK55: NK55_08075
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Entry
NK55_08075 CDS
T02977
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
thn
Thermosynechococcus sp. NK55
Pathway
thn02024
Quorum sensing
thn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NK55_08075 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NK55_08075 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thn03019
]
NK55_08075 (hfq)
03036 Chromosome and associated proteins [BR:
thn03036
]
NK55_08075 (hfq)
Messenger RNA biogenesis [BR:
thn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NK55_08075 (hfq)
Chromosome and associated proteins [BR:
thn03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
NK55_08075 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq_1
Hfq
Coat_X
Motif
Other DBs
NCBI-ProteinID:
AHB88894
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All DBs
Position
1690305..1690523
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AA seq
72 aa
AA seq
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MTDEFNTALPSIRQVQTFIKDSTEVEVKLSTSDLVVGKVRWQDTNCLCVVDHYDQPTIIW
KQAIVFIKPKLA
NT seq
219 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgaatttaacacggcactgcctagcattcgccaagtacagaccttcattaaa
gatagcaccgaggttgaagtcaagctcagcaccagcgatcttgtggttggcaaagtgcgc
tggcaggatacgaattgcctctgcgttgtcgatcactatgatcaacccacaattatttgg
aagcaggccattgtctttattaaaccgaagctagcctaa
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