Thermosynechococcus sp. NK55: NK55_08280
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Entry
NK55_08280 CDS
T02977
Symbol
dnaEC
Name
(GenBank) DNA polymerase III alpha subunit DnaEC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
thn
Thermosynechococcus sp. NK55
Pathway
thn03030
DNA replication
thn03430
Mismatch repair
thn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NK55_08280 (dnaEC)
03430 Mismatch repair
NK55_08280 (dnaEC)
03440 Homologous recombination
NK55_08280 (dnaEC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thn03032
]
NK55_08280 (dnaEC)
03400 DNA repair and recombination proteins [BR:
thn03400
]
NK55_08280 (dnaEC)
Enzymes [BR:
thn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NK55_08280 (dnaEC)
DNA replication proteins [BR:
thn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NK55_08280 (dnaEC)
DNA repair and recombination proteins [BR:
thn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NK55_08280 (dnaEC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
AHB88933
LinkDB
All DBs
Position
complement(1729536..1732154)
Genome browser
AA seq
872 aa
AA seq
DB search
MSFVGLHIHSDYSLLDGASQLPDLVARAMELGMPAIALTDHGVMYGAIELLKLCRGKPIK
PIIGNEMYVINGDITKQERKPRFHQVVLAKNKQGYHNLCKLTTISHLQGFQGKGIFARPC
INKELLAQYREGLIVTSACLGGEIPQAILQGKPELARSVAAWYQATFGEDFYLEIQDHGS
QEDRVVNVELVRIGRELGIKVIATNDSHFISCHDVEAHDALLCIQTNKLLSDEKRMRYSG
TEYLKSAAEMARLFRDHLPDEVIQEALANTLAVAAKIEAYNIFREPQSPEFPVPPGHTAD
TYLEQVAWQGLLERFHLSNRQQLEATYRQRLEYELKMLQQMGFSNYFLVVWDYIKYARDH
NIPVGPGRGSAAGSLVAYALRITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIDRREEV
IQYVTQKYGSDRVAQIITFNRMTSKAVLKDVARVLDIPYSQADQMAKLIPVVRGKPVKLA
VMISEETPSPEFKEKYDSDPLVRRWIDMAMRIEGTNKTYGVHAAGVVIASEPLDQLVPLQ
RNNDGAVITQYFMEDLESLGLLKMDFLGLKNLTMIQKTQELIEKNHGQRIDLDALPLDDA
KTYQLLAEGKLEGIFQLESSGMRQIVRELKPSNLEDISSVLALYRPGPLDAGLIPKFINR
KHGREPIQYQHELLKPILSETYGVLCYQEQIMRMAQDLAGYSLGQADLLRRAMGKKKKEE
MEKHEALFIEGAAKNGVPSAIAQELFKQMLDFAEYCLSGETAVMTVEYGAVPIRRLVQER
LTCHVYSLDAQGHLYTQPIAQWHFQGFRPVYEYQLEDGSTIWATPDHRFMTTRGQMLPIE
QIFQEGLELWQGPIAPSQALLQGLKPAVQMCC
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgtcggtctgcatattcacagtgattacagtcttcttgatggtgccagccag
cttcccgacctagtggcacgggcaatggaattggggatgcccgcgatcgccctcacggac
cacggggtaatgtatggtgccattgaactgctaaagctctgccgtggtaagcccatcaag
cctattatcggcaatgaaatgtatgtcatcaatggcgacatcaccaagcaggagcgcaaa
ccccgctttcaccaagtggtgctggccaaaaataaacagggctaccataacctctgcaaa
ctcaccaccatctctcaccttcagggctttcagggcaagggaatttttgcccgcccctgc
atcaacaaagaactgttggctcaataccgtgaggggctaattgtcaccagtgcttgcctc
ggcggtgagattccccaagccattttgcagggcaagccagagttggcccgcagtgttgct
gcctggtatcaagcgacctttggtgaggatttttaccttgagatccaagaccacggcagt
caagaggatcgggtggtgaacgttgaactggtgcgcattggccgtgagttggggatcaaa
gttattgccaccaatgactcccactttatttcctgtcatgacgttgaagcccacgatgcc
ctgctttgtatccaaaccaacaagctgctcagtgatgagaagcggatgcgctacagcggt
acggagtacctgaaatccgccgctgaaatggctcggctgtttcgggatcatttgcccgat
gaggtcattcaagaggccttggcgaataccctcgcagtagccgccaagattgaagcctat
aacatctttcgtgagccccaaagtccagagtttccggtgccgcctggccatacagcagat
acctacctagagcaagtggcatggcaaggactgttggagcgatttcacctcagcaatcgc
caacagttggaggccacctatcggcagcgtttggaatacgaactcaaaatgctccagcag
atggggttctccaactatttcctagtcgtttgggactacatcaaatatgcccgcgaccac
aacatccccgtgggtccaggccggggatcggcagcgggttcccttgtggcctatgccctg
cgcattaccaacattgatccggttcaccatggcttgctctttgagcgctttttgaatcct
gagcgcaagtccatgcccgacattgatacggacttttgtattgaccgccgcgaggaagtc
atccagtacgtgacccaaaaatacggcagcgatcgcgtcgcccagatcattaccttcaac
cgcatgacctccaaggcggtgctcaaggatgtggcacgggtgctggatattccctatagc
caagcggatcaaatggcgaaactgattcccgtggtgcggggcaaaccggtcaaattggca
gtcatgatctccgaggaaaccccctcgccggagtttaaggaaaagtacgacagtgatccg
ctcgtgcgccgctggattgatatggccatgcgcattgagggcaccaacaaaacctatggt
gtccatgccgctggcgtcgtcattgcctcagaacccttggatcaactggtgccgctgcag
cgcaacaacgatggcgcagtgattacccagtacttcatggaggatttagaatccctcggc
cttctgaagatggactttctgggtctgaaaaatctgaccatgatccagaaaacccaagaa
ctgatcgagaaaaaccatggtcagcgaattgaccttgatgctttacccctcgatgatgcc
aaaacctatcaactgttagcggaaggtaaactggagggaatttttcaactggaatcctcg
gggatgcgccaaattgtccgtgaattgaagccctcgaatctggaggacatttcctcggtg
ctggcgctctatcgaccgggacctttggatgctgggctgatcccgaaattcattaaccgc
aagcatgggcgggaaccaattcaatatcaacatgagcttttgaagccgattttaagcgaa
acctacggcgtcctgtgttatcaggagcagattatgcggatggcacaggacttggcgggc
tattccctaggtcaagcggatctcctccgccgcgcgatgggcaaaaagaaaaaagaggaa
atggaaaaacatgaagccctcttcatcgagggagcagctaaaaatggtgtgcccagtgcc
atagcccaagaactttttaagcagatgctggatttcgctgaatactgtctgagtggtgag
accgcggtgatgaccgtggaatatggtgcggttcccattcggcgcttggtgcaggagcgg
ttgacctgtcatgtgtatagtcttgatgcccaaggtcatctttatacgcagcccattgcc
cagtggcattttcagggcttccgtcccgtgtatgagtatcaactggaggatggctcgacc
atttgggcaacaccggatcaccgctttatgaccaccaggggccagatgctgcccattgag
caaatttttcaggaaggactagagctatggcaaggcccgatcgcccccagtcaggcgctt
cttcaaggtctcaaaccagcggtgcagatgtgctgctag
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