Thermosynechococcus sp. NK55: NK55_09110
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Entry
NK55_09110 CDS
T02977
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase II PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thn
Thermosynechococcus sp. NK55
Pathway
thn03420
Nucleotide excision repair
thn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NK55_09110 (pcrA)
03430 Mismatch repair
NK55_09110 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thn03400
]
NK55_09110 (pcrA)
Enzymes [BR:
thn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NK55_09110 (pcrA)
DNA repair and recombination proteins [BR:
thn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NK55_09110 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NK55_09110 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
ResIII
DEAD
PcrA_UvrD_tudor
AAA_11
Viral_helicase1
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AHB89085
UniProt:
V5V6R9
LinkDB
All DBs
Position
1910904..1913231
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AA seq
775 aa
AA seq
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MSSDFLAGLNPSQRQAVEHYSGPLLVVAGAGSGKTRTLTYRIAHLIRHRQVAPENILAVT
FTNKAAREMKERIEALFSQEMAKELYGRDWLDLSPAEQQRVRSRVYHTYTKPLWIGTFHS
LCARLLRLEIEAYQHPQGYRWTRHFTIFDESDVQTLIKGIITGELNLDERRHDPRAIRYK
ISYAKNRRLSPDQLEQEQRSPAGRVAAEVYRRYEAALAKNNALDFDDLILRTVHLLQQRP
ERLDYWHQQFQHILVDEYQDTNRTQYDFIRLLATNGTPPQQFQNWGNRSIFVVGDVDQSI
YSFRCADFTILMNFQQDFGDRLPDQDTRTMIKLEENYRSVANILQAANYLIEHNSERIDK
VLRPTKDPGPPIHCECCDTETDEAYFIAQQIKALGSQSLEPQWGRFAILYRTNAQSRPFE
EALVRANIPYTVVGGLKFYERKEVKDILAYLRLLQNPQDTVNLRRIINVPRRGIGKTTLE
RLSDAAQTLGISLWDLIADTESMTPLAGRASRALQQFVTLMTRLRSLVDDIELPELVKTV
IEETGYRRELENAGTDESLERLQNLMELVNAAQQFSEENEGASLSDFLNSSALASDLDTL
QEGEGGVSLMTLHAAKGLEFPVVFLVGMEQGLFPNFRSLNDPMALEEERRLCYVGITRAQ
ERLFLTFAQSRRLYNGREDTIPSQFLTELPPELLTGNVQRRPPRATVMKVSPSRLSKAAA
SLWRVGDRIVHPVYGEGEITHVFNVGAKLSLVVRFPRRGQRVVDPRLTPLEKLSY
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgattttctcgcaggactcaatccctcacagcggcaggcagtggagcactac
tcgggtcccctgttggtggtggcaggagccggttctgggaaaacgcgcacgctcacctat
cgaattgcccatttgattcgccatcgtcaggtagcaccagagaatatcttggcggtgacg
tttaccaataaggccgcccgcgaaatgaaagagcggattgaagccctttttagccaagag
atggccaaggaactctacggcagagactggctggatctgtcccctgcagaacagcagcgg
gtgcgatcgcgcgtctatcacacctacaccaagcccctatggattggcaccttccacagc
ctatgtgctcgacttctgcgcttggaaattgaggcctatcaacatccccaagggtatcgc
tggacgcggcattttacaatttttgatgagtcagatgtacaaaccctaatcaagggaatt
attacgggtgaactcaatctcgatgagcgcaggcatgatccgcgcgctatccgctacaaa
attagctatgccaaaaaccgcagactcagcccagatcaattggagcaggaacagagatcg
cccgctggtcgtgtagcagcagaggtttatcgtcgctatgaggcagctcttgccaagaat
aatgcccttgattttgatgatttaattttgcgaacagtgcatctgctgcaacagcgccct
gagcgtcttgactattggcatcagcagttccagcatatcctggtggacgagtaccaagat
accaatcgcacccagtacgatttcattcggctgttggccaccaatggcaccccccctcaa
cagtttcagaattggggcaatcgctcaatttttgtggtcggcgatgtagatcaatccatc
tattcatttcgctgtgccgatttcactatcctgatgaatttccagcaggattttggcgat
cgcctacccgatcaggatacccgcacaatgatcaagttggaagaaaactatcgctccgtt
gccaacattttgcaggccgccaattatctcattgagcacaacagtgaacgcattgataaa
gtgctacgtcccaccaaggatcccggtccccccattcactgtgaatgttgcgacactgaa
accgatgaagcctatttcattgcccaacagattaaagccttgggcagtcaatccctcgaa
ccccaatggggacggtttgcgattctctaccgtaccaatgcccaatctcgcccctttgag
gaggctttagttcgcgcaaatattccctacaccgtggttggtggtctcaagttctatgag
cgcaaagaagtcaaggatattctcgcctacctgcggctgctgcaaaatcctcaagacacc
gtgaatctgcggcgaattatcaatgtgccgcgccgcggtattggcaaaaccacgctagag
cgcctcagcgatgctgcccaaacccttggcatttccctgtgggacttaattgctgatacc
gaatccatgacaccgttggctgggcgagccagccgggcactgcagcagtttgtgaccctc
atgacccgcctgcgatcgctagtagacgatattgaactccctgaactggtgaaaaccgtg
attgaagagacaggctaccgccgcgaactcgaaaacgcaggcaccgacgaaagcttagag
cgactgcaaaacctgatggaattggtcaacgctgcccagcaatttagcgaggagaatgag
ggggccagcctcagcgatttcctcaacagttctgcccttgcctcagatttggatacattg
caagagggagaggggggcgtctccctaatgaccttacatgctgccaaggggctagaattt
cccgtggtctttttggtggggatggagcagggactgtttcccaacttccgcagtctcaac
gatcccatggccctagaagaggaacgccgcctctgctatgtgggcattacccgtgcccag
gagcgcctctttctgacctttgcccaaagccgtcgtctttacaatggcagggaagacacg
ataccgtcgcaatttctgacggagctacccccagaactgctcacgggcaatgttcaacgc
cgccccccaagggccactgtcatgaaggtatccccctcgcggttaagcaaggctgctgcc
tcgctttggcgggtgggcgatcgcattgtccatcccgtctatggcgaaggggaaattacc
catgtcttcaatgtgggggcgaaactctctttggtggttcgctttccgcgacgcgggcaa
agggtcgttgatccccggctgacgccccttgagaagctcagctactaa
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