Thermosynechococcus sp. NK55: NK55_10100
Help
Entry
NK55_10100 CDS
T02977
Name
(GenBank) DNA/RNA helicases SNF2 family
Organism
thn
Thermosynechococcus sp. NK55
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
PLDc_2
ResIII
RE_NgoFVII
DEAD
AAA_22
DUF6188
Motif
Other DBs
NCBI-ProteinID:
AHB89266
UniProt:
V5V7D5
LinkDB
All DBs
Position
2106124..2109678
Genome browser
AA seq
1184 aa
AA seq
DB search
MPLVVTGPPLPQQLSLWPHKEIAMPQIYDNTSQVLADGLRQFIGSAQSCAFCVGYLNLRG
WDQLADLVDKLPGRTENAACRVLVGMHRPPEEEMKVLASLRRGDEIVDGPTLARLKRHMT
ESFKQQLEFGVPSAQAERTLRQLAAQLRARKVFLKAFLRYPLHAKLYLVRRNDPVTPLIG
FVGSSNLTLAGLSHQGELNVDVVEQDAATKLQAWFDERWQDGLAIDLSDTLAELIERSWA
RTDLVRPYLLYLKIAYHLSEEARQGEREFRLPRIFTEKGTPLLDFQERAVSLAAHYLYRR
GGVLLGDVVGLGKTLMATAIARIFQEDDQSNTLVVCPPKLAPMWEQYLQTYEIHGRVLSL
GKVETLGRDDGPRYRLLIIDESHNLRNRKSKRYRALRDYIERNEPRVLLLTATPYNKHFT
DLGNQLRLFLDENQDLHVRPERFFQAWAADGKSEMDFIARFQTSPHSLRAFEQSPYAEDW
RDLMRLFLVRRTRQFIMSHYATFDEEKQRYYVLLNDRPAYFPLRVPKRLEFPIRENDPTD
QYARLFRDDVVEVIERLTIPRYGLAQYLVDHADRDAKGDEKRILDNLNRAGRRLIGFCRT
NLFKRLESSGHSFLLSVRRHILRNLVTLYALEHGLHIPIGTQDAAMLDTAVSDSDADEEF
AVTQENLAATANDSIPEEAALESTSRPFEAFRNRARSIYYTYATQFRNRRNRRNRFDWLD
LKFFRPELRQALEEDTTALLGILARIRTWNPNRDAKLEELTRLLTTQHSNDKVLIFTQFA
DTAQYLKRELSRRGLRDLEVVTNQANDPVALARQFSPSSNGGLRPGEQELRILIATDVLA
EGQNLQDAHIIVNYDLPWAIIRLIQRAGRVDRIGQQHDTILVYSFLPAEGVERLIRLRQR
LFLRLQQNREVIGTDETFFGEEAANKLRDLYTEKAGTLDDDQADEDIDLASLAFQVWKSA
SEPDQKEAIALPSIVSATRALPETADPAQHPPGVITYLRYPDGTDVLVRVDERGELVSQS
ISAIFSAAACAPDEPALPRAVNHHELVARCVGIATEEQTALGGQLGSLRSVRHKLYERLK
RYRQQLQAKPTPSSSAILPKLDSVLDRIWRYPLKQAAKEALSRQMHLDITDEALLELVLR
RAADENLCEVTTEDDHVPAEPRIICSMGLALASTMPANTGDDKQ
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
gtgccccttgtagttaccggtcctcctctacctcagcagctctccctttggccgcacaaa
gagatagcaatgccccagatttacgacaacaccagccaagtacttgccgatgggctgcgc
cagttcatcggcagcgcccagtcctgcgccttctgcgttggctacctcaacctacggggt
tgggaccaattggccgacctcgtggacaagttgccgggaagaacagaaaacgccgcctgc
cgcgtgctggttggtatgcaccgtccccccgaagaagaaatgaaagtgctcgccagcctc
aggcgcggcgatgagatagtggacggtcccacgctcgcccgactcaagcgccacatgacc
gaaagcttcaagcagcaactggagtttggtgtaccatcggcccaagccgaacgcacgctc
cgccagttggctgcccagcttcgcgcgcgcaaggtcttcctgaaagcgtttctccgctat
ccgttgcatgccaagctgtacctcgtgcggcgcaacgatcccgtcacacccctcatcggc
tttgtcggcagcagcaaccttaccctggccggcctgtcgcaccagggcgagttgaatgtg
gatgtcgtcgaacaagatgctgccacgaaattgcaagcctggtttgatgagcggtggcag
gatggattagcgatcgacctgagtgatacgctcgctgaactcattgagagaagttgggcg
cgtaccgatttggttcgcccgtatctgctctatctcaagatcgcctaccacctctccgag
gaggcgcgccaaggtgagcgcgagttccgcctccctcgcattttcactgagaaaggcaca
ccgttgctcgattttcaggagcgggccgtttccctggcggcccattatctctaccgccgg
ggtggtgtgttgcttggcgatgtggtagggctgggcaagacgttgatggcgacggccatt
gcccgcatctttcaggaggatgaccagagcaacacgctagtcgtttgcccgccgaagctc
gcgcccatgtgggagcagtatctgcagacctacgaaatccacggccgcgtgctctcactc
ggcaaagtcgaaacgttggggcgcgacgacgggccgcgctaccgcctcctcatcattgac
gaaagccacaacctgcggaaccgtaaaagcaagcgctaccgcgccttgcgcgactacatc
gagcgcaacgagccacgggtgctcttgcttaccgccacaccttacaacaaacactttacc
gacctgggcaaccaactgcggctttttctggacgaaaaccaagacctgcacgtacgaccc
gaacggttcttccaagcatgggcagcggatggaaaaagcgaaatggacttcatcgcgcgc
ttccaaacctcaccgcactcattgcgtgcctttgagcaaagcccctacgcggaggactgg
cgcgacctgatgcgcctctttctagtacgacgcacgcgccagttcatcatgagccactac
gcgacgttcgacgaggaaaagcagcgttactacgtcctactgaacgacaggcctgcatac
tttccgctgcgcgtgcccaagcgtctcgagttccccatccgagaaaacgatcccaccgac
cagtacgcacggctcttccgcgatgatgtcgtggaggtcatcgagcggctcaccatccct
cgctatggcctggcgcagtacctcgtcgatcatgccgatcgcgatgcgaaaggcgatgaa
aagcgcatcctcgataacctcaaccgtgcgggccgccgcctcatcggcttttgccggacc
aacctcttcaagcggctcgaatcgagtggccacagttttctgctctccgtgcgccggcac
atcctgcgcaatcttgtcacgttgtatgcgctcgaacacggtctgcacattcccatcggc
acgcaggatgccgccatgctcgatacggcggtaagcgacagcgacgccgatgaagagttc
gcggtaacccaagaaaacctcgcagcaacagccaacgacagcattccagaagaggcagcc
cttgagagtacatccagaccttttgaggcgtttcggaatcgtgctcgttcgatctactat
acctatgcgacgcaattccgaaatcgccgaaatcgccgaaatcgcttcgattggcttgac
ctgaagttcttccgccctgaactccggcaggcgctcgaagaggacaccactgcgctgctg
ggcatcctcgcacgtatccgtacgtggaaccccaaccgcgatgccaagcttgaagaactt
accaggctgctgaccacacagcacagcaatgataaagtgctgatctttacccagtttgcc
gatactgcgcagtacttgaaacgcgagctgagcagaagaggcctccgcgatctcgaggtc
gtgaccaatcaggccaacgatccggtggcactggcacggcagtttagcccgtcctcgaac
ggcggcctgcgtccgggcgaacaggagctgcgcatcttgattgccaccgatgtgctggct
gaggggcagaacctgcaagacgcccacatcatcgtcaattacgacctcccctgggcaatc
attcgccttatccagcgtgccggccgcgtggatcgtatcggtcagcaacatgacacgatc
ctggtgtactcgttcctgcctgccgagggggttgagcggctcatccggctgcgtcagcga
cttttccttcggcttcagcaaaaccgggaagtcatcggcaccgacgaaaccttcttcggc
gaggaagcggctaacaaactgcgcgatctctacaccgaaaaagccggcacactcgacgac
gaccaagccgacgaagacattgacctggccagtctggcattccaagtttggaagagcgct
tccgagcccgatcaaaaggaagccatcgccctgccgtctattgtctctgccacacgcgca
ctcccagagaccgccgatccagcgcagcatccgcctggtgtgattacctacctccgctac
cccgatggcaccgacgtccttgtgcgtgtggatgaacgcggtgaactggtgtcccagtcc
atctcagccatctttagcgcggctgcctgcgcaccagacgagccagcgctgccgcgggca
gtaaaccatcacgaactcgttgcccgttgcgtgggcattgccactgaggagcaaaccgcc
ctcggcggtcaactcggttcgctgcgcagcgtgcgccacaagctctacgaacggctcaag
cgctatcgccagcagcttcaggccaagcccaccccctcctcttcagccatcctgccaaag
ctcgatagcgtgctcgatcggatctggcgatacccgctcaagcaggccgctaaggaagcc
ctcagccggcagatgcacctggacatcaccgatgaagcactgctcgagctggtgctgcgc
cgcgcagcggacgagaacctctgtgaagtcaccaccgaggacgatcacgtgccagccgaa
ccgcgcatcatctgctcgatgggactggcgcttgcttcaaccatgccagcaaacacggga
gatgacaagcaatga
DBGET
integrated database retrieval system
