Thermosynechococcus sp. NK55: NK55_10505
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Entry
NK55_10505 CDS
T02977
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
thn
Thermosynechococcus sp. NK55
Pathway
thn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NK55_10505 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thn03019
]
NK55_10505 (recQ)
03400 DNA repair and recombination proteins [BR:
thn03400
]
NK55_10505 (recQ)
Enzymes [BR:
thn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NK55_10505 (recQ)
Messenger RNA biogenesis [BR:
thn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NK55_10505 (recQ)
DNA repair and recombination proteins [BR:
thn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NK55_10505 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Xre-like-HTH
TcdB_toxin_midN
Motif
Other DBs
NCBI-ProteinID:
AHB89342
UniProt:
V5V918
LinkDB
All DBs
Position
2210234..2211685
Genome browser
AA seq
483 aa
AA seq
DB search
MPEADLKPIQAALQQYWGYSELRSPQAEVMIALLQRRDALVVLPTGAGKSLCFQLPAVLQ
RGLTLVVSPLLALMENQITELRQRGLAAAAYHSELPSSQRRQILSHLRDYRLLYLSPESL
FSSPLWQRLCSAEVELNGLIVDEAHCLVQWGDRFRPAYRRLGTVRPALRQCKPQQPPLAI
AAFTATADPHAQRTLIEVLGLEQPVQIIHSPYRANLYLAVRSVWSRGYRRHCLQQFLKQQ
GRTCGLIYARTRHDCETLATWLQEQGHRSSAYHGGLPAVQRRQIESDWLQDKLPFVVCTN
AFGMGVNKPNVRWICHYQPPLQLSEYLQEVGRAGRDGQPAQALVLVSDRWGLDREDQQRW
YFFQRQSQDTYNRAMALQAQLPLRGNLQQLRQHFPEVELTLALLHQQGALRWQDPFHYCR
QPLAQVPPPPKDPQEQLMQEFLYQRGCRWQFLLQAFGFATEARGFHCGHCDRCRPAHRSR
KTL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgccagaggccgatttgaagccgatacaggctgccctacagcaatactggggctattct
gagttgcgatcgccccaagcagaggtgatgatagcactcttgcaacgacgggacgcccta
gttgtgctgcccacaggagcgggcaaaagtctctgttttcagttgccagcagtgcttcaa
cggggattgacgctggtggtttcgccgctgcttgccctcatggaaaatcagatcactgaa
ttgcggcaacggggtcttgcggccgcagcctatcacagtgaactgcccagcagccaacgc
cgccagattctctcgcacctaagggactaccgtttgctgtatctttcgccggagtcctta
ttttctagccctctttggcagcgcctctgttcagcagaagtggaactcaatggcttgatt
gtggatgaagcccattgccttgtgcagtggggcgatcgctttcgacccgcttatcgtcgc
ttgggaacggtgcgccctgcccttcgccaatgtaaacctcagcagccacccctggcgatc
gctgcctttaccgccactgccgatccccatgcccaacgcaccctgattgaggttttaggt
ctagaacagcctgtacagatcattcacagcccctatcgggccaatctctatttggccgta
cgttctgtgtggagtcgggggtatcgccgccattgtctccagcaatttctcaagcagcag
gggagaacctgcggattgatctatgcccgcacccgccacgattgtgaaacccttgccact
tggcttcaggagcagggacaccgcagcagcgcttaccatggcggactaccggcagtacag
cgacgccaaattgagagcgattggttgcaggacaaactgccttttgtggtctgtaccaat
gcctttggtatgggagtcaataaacccaatgtgcgttggatttgtcactaccagccgccc
ctgcaactcagtgaatatctccaagaggtgggacgggctgggcgggatggtcagccggca
caggcactggttttggtgagcgatcgctggggtttggatcgcgaagatcaacagcgttgg
tatttttttcagcgccaaagtcaagacacttacaatcgcgccatggcactgcaggcgcag
ctgcccctgcggggcaatcttcagcaactgcggcaacactttcctgaggtggaattgacc
ctggcattactgcatcaacagggggcactccgctggcaagacccctttcactattgccgt
caacccttggcacaggtgccacccccgcccaaagaccctcaagaacagttgatgcaagag
ttcctctatcagcggggctgccgctggcagtttctcctccaagcctttggttttgccact
gaggcaaggggattccactgtggccattgcgatcgctgtcggcctgcgcaccgctcccgc
aaaacactgtaa
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