KEGG   Candidatus Thioglobus autotrophicus: SP60_00670
Entry
SP60_00670        CDS       T04079                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
tho  Candidatus Thioglobus autotrophicus
Pathway
tho03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tho00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SP60_00670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tho03400]
    SP60_00670
DNA repair and recombination proteins [BR:tho03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SP60_00670
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SP60_00670
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_22 AAA_30 P-loop_SecA Kinesin
Other DBs
NCBI-ProteinID: ALE53174
UniProt: A0A0M4PLS6
LinkDB
Position
complement(123146..125140)
AA seq 664 aa
MGKKFQLESQFSPSGDQPSAIRTLVDGINAGEKFQTLLGVTGSGKTFTLANVIKQTKRPS
LIMAPNKTLAAQLYAEMKEFFPHNAVEYFVSYYDYYQPEAYVPASDTFIEKDSSINEQIE
QMRLSATKSLLERDDVIIIASVSAIYGLGDPESYMSMLLHLSVGEVSNQREILSRLSQMQ
YTRNDVTLLRGCFRVKGEVIDIFPADSEEQALRIEMFDEEIERLYWFDPLTGERLKSLQR
ITIYPQTHYVTPKSKILNMLDDVKDELKVRRKELLSLNKLVEEQRLTQRVHMDIEMMREL
GYCTGIENYSRYLSSRKPGDPPPTLLDYLPENSLIILDESHVTVGQIGGMYNGDRARKKT
LVEFGFRLPSALDNRPLKYDEFEQRIHQCILVSATPSQYEFDVSSTIAEQVVRPTGLLDP
EIEIRPVGTQVDDLLSEIHKRVKVGDRVLVTTLTKKMSEQLSEYLNEHGVKVRYLHSDID
TVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTMGR
AARNVNGKAILYADRITKSMKKAMDETQRRREKQEQHNQENNITPRGVVKPIINILETDL
TSEEIAEDNHEQLIVQLSPVQLAKEIKLLEKQMYKLASDLEFEKAADVRNQIKNLKDSQF
KTAL
NT seq 1995 nt   +upstreamnt  +downstreamnt
gtgggcaaaaaatttcaactagaatcacaattttctcccagtggagatcagccaagtgct
attcggactttggtggacggtataaatgcaggtgagaagtttcaaacgcttttaggtgtt
accggttcaggcaagacatttaccctggcaaatgtgattaaacaaaccaagcgcccaagc
ttgattatggcgcctaataagacattagccgcccaactgtacgctgagatgaaagaattt
ttcccgcataatgcggtggagtattttgtctcgtattatgattattaccagcctgaagcc
tacgtgccagcctctgacacctttattgaaaaagactcttcaattaatgagcaaattgag
caaatgcgcctgtctgctaccaaatctcttttagaacgagacgacgttattattattgcc
agtgtatccgctatttatggtttgggtgatcctgagagttatatgtcaatgctgttgcat
ttgagcgttggagaggtttctaaccagagagaaatattatcacgtttatcgcaaatgcaa
tatacgcgtaacgatgttactttgctaagaggctgctttcgagtgaaaggtgaagtgatt
gatatttttccagcagactccgaagagcaagccttacgtattgaaatgtttgacgaagag
attgagcgactatattggtttgatccattaacgggtgagcgccttaagtccttacaacgt
ataaccatttatccacaaacgcattatgtaacaccaaaatccaagattttaaatatgctg
gatgatgttaaagatgagttaaaggttcgaagaaaagaactgctttctttaaataaatta
gtagaggagcagcgtctgactcagcgtgtgcatatggatatcgaaatgatgcgtgagctg
ggttattgcacgggtattgaaaattattcgcgttatctatcttcacgcaaaccaggcgat
ccaccaccaactttgttggattatttgcctgaaaactccttaattattttggatgagtcg
catgtgactgttggccaaattggtggcatgtataacggcgatagggcgcgcaaaaaaaca
ctggtagagtttggatttcgcctgccttctgcgctagataaccgccctttaaagtatgac
gagtttgaacagcgtattcatcaatgtattttagtctctgcaacgccatctcaatacgag
tttgatgtttctagtacgattgcagagcaggtagtacgcccaactggactattagaccct
gaaatagaaattagaccagtgggcactcaggtggatgatttactcagtgaaattcacaag
cgtgttaaggtgggtgatcgagtattggtcaccacactgactaaaaaaatgtctgaacaa
ttaagtgaatacttaaacgaacatggggttaaggttcgttacctacattctgatattgat
acggttgagcgcgttgaaattattcgagatttacgtcttggtgtatttgatgtcttagtg
ggtattaacttactcagagaaggattagacatacctgaggtgtctttagtggcgatattg
gatgcagacaaagaaggattcttgcgctctgaaagatcgctcattcagaccatgggtagg
gcggctagaaatgttaacggtaaggcaattttatatgctgatcgaattactaaatcgatg
aaaaaagccatggatgaaacgcagagaaggcgtgaaaaacaagagcagcataaccaagaa
aacaacattaccccacgaggtgttgttaagcctattattaatattttagaaacagattta
accagtgaagaaatagctgaagataatcatgaacagctaatagttcaactatcccccgtg
caactggctaaagaaattaaattattagaaaaacaaatgtataagcttgccagtgattta
gagtttgaaaaggctgcagatgtacgtaatcaaataaaaaacttaaaagattctcaattt
aaaaccgccttatga

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