Candidatus Thioglobus autotrophicus: SP60_00670
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Entry
SP60_00670 CDS
T04079
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tho
Candidatus Thioglobus autotrophicus
Pathway
tho03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SP60_00670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tho03400
]
SP60_00670
DNA repair and recombination proteins [BR:
tho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SP60_00670
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SP60_00670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
P-loop_SecA
Kinesin
Motif
Other DBs
NCBI-ProteinID:
ALE53174
UniProt:
A0A0M4PLS6
LinkDB
All DBs
Position
complement(123146..125140)
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AA seq
664 aa
AA seq
DB search
MGKKFQLESQFSPSGDQPSAIRTLVDGINAGEKFQTLLGVTGSGKTFTLANVIKQTKRPS
LIMAPNKTLAAQLYAEMKEFFPHNAVEYFVSYYDYYQPEAYVPASDTFIEKDSSINEQIE
QMRLSATKSLLERDDVIIIASVSAIYGLGDPESYMSMLLHLSVGEVSNQREILSRLSQMQ
YTRNDVTLLRGCFRVKGEVIDIFPADSEEQALRIEMFDEEIERLYWFDPLTGERLKSLQR
ITIYPQTHYVTPKSKILNMLDDVKDELKVRRKELLSLNKLVEEQRLTQRVHMDIEMMREL
GYCTGIENYSRYLSSRKPGDPPPTLLDYLPENSLIILDESHVTVGQIGGMYNGDRARKKT
LVEFGFRLPSALDNRPLKYDEFEQRIHQCILVSATPSQYEFDVSSTIAEQVVRPTGLLDP
EIEIRPVGTQVDDLLSEIHKRVKVGDRVLVTTLTKKMSEQLSEYLNEHGVKVRYLHSDID
TVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTMGR
AARNVNGKAILYADRITKSMKKAMDETQRRREKQEQHNQENNITPRGVVKPIINILETDL
TSEEIAEDNHEQLIVQLSPVQLAKEIKLLEKQMYKLASDLEFEKAADVRNQIKNLKDSQF
KTAL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaaaaaatttcaactagaatcacaattttctcccagtggagatcagccaagtgct
attcggactttggtggacggtataaatgcaggtgagaagtttcaaacgcttttaggtgtt
accggttcaggcaagacatttaccctggcaaatgtgattaaacaaaccaagcgcccaagc
ttgattatggcgcctaataagacattagccgcccaactgtacgctgagatgaaagaattt
ttcccgcataatgcggtggagtattttgtctcgtattatgattattaccagcctgaagcc
tacgtgccagcctctgacacctttattgaaaaagactcttcaattaatgagcaaattgag
caaatgcgcctgtctgctaccaaatctcttttagaacgagacgacgttattattattgcc
agtgtatccgctatttatggtttgggtgatcctgagagttatatgtcaatgctgttgcat
ttgagcgttggagaggtttctaaccagagagaaatattatcacgtttatcgcaaatgcaa
tatacgcgtaacgatgttactttgctaagaggctgctttcgagtgaaaggtgaagtgatt
gatatttttccagcagactccgaagagcaagccttacgtattgaaatgtttgacgaagag
attgagcgactatattggtttgatccattaacgggtgagcgccttaagtccttacaacgt
ataaccatttatccacaaacgcattatgtaacaccaaaatccaagattttaaatatgctg
gatgatgttaaagatgagttaaaggttcgaagaaaagaactgctttctttaaataaatta
gtagaggagcagcgtctgactcagcgtgtgcatatggatatcgaaatgatgcgtgagctg
ggttattgcacgggtattgaaaattattcgcgttatctatcttcacgcaaaccaggcgat
ccaccaccaactttgttggattatttgcctgaaaactccttaattattttggatgagtcg
catgtgactgttggccaaattggtggcatgtataacggcgatagggcgcgcaaaaaaaca
ctggtagagtttggatttcgcctgccttctgcgctagataaccgccctttaaagtatgac
gagtttgaacagcgtattcatcaatgtattttagtctctgcaacgccatctcaatacgag
tttgatgtttctagtacgattgcagagcaggtagtacgcccaactggactattagaccct
gaaatagaaattagaccagtgggcactcaggtggatgatttactcagtgaaattcacaag
cgtgttaaggtgggtgatcgagtattggtcaccacactgactaaaaaaatgtctgaacaa
ttaagtgaatacttaaacgaacatggggttaaggttcgttacctacattctgatattgat
acggttgagcgcgttgaaattattcgagatttacgtcttggtgtatttgatgtcttagtg
ggtattaacttactcagagaaggattagacatacctgaggtgtctttagtggcgatattg
gatgcagacaaagaaggattcttgcgctctgaaagatcgctcattcagaccatgggtagg
gcggctagaaatgttaacggtaaggcaattttatatgctgatcgaattactaaatcgatg
aaaaaagccatggatgaaacgcagagaaggcgtgaaaaacaagagcagcataaccaagaa
aacaacattaccccacgaggtgttgttaagcctattattaatattttagaaacagattta
accagtgaagaaatagctgaagataatcatgaacagctaatagttcaactatcccccgtg
caactggctaaagaaattaaattattagaaaaacaaatgtataagcttgccagtgattta
gagtttgaaaaggctgcagatgtacgtaatcaaataaaaaacttaaaagattctcaattt
aaaaccgccttatga
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