Candidatus Thioglobus autotrophicus: SP60_01195
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Entry
SP60_01195 CDS
T04079
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tho
Candidatus Thioglobus autotrophicus
Brite
KEGG Orthology (KO) [BR:
tho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tho03016
]
SP60_01195
Enzymes [BR:
tho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SP60_01195
Transfer RNA biogenesis [BR:
tho03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SP60_01195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ALE51982
UniProt:
A0A0M4NSW5
LinkDB
All DBs
Position
226196..227239
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AA seq
347 aa
AA seq
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MIQTQQQLTHFLNTIETQTHLAIDTEFKRIDTFYPILCLVQIATENAVECIDILAIEDLE
PLFKKLYQTDSVWIVHSARQDIEALYYLSKRLPTQLFDTQIAAHFLNHPAQISYQNLTEI
LQGVILDKAYTRLDWTTRPLPEAALEYALDDVRYLIKNYAQLNEQLTTEDKLDWLMQDGL
DLSDIRLYLPNLEQAWKKIKGLSRLPKSTHQKAAQLAAWRESQAIDRNKPRKWIMSDEQL
LDYSLKKTKLSDANQSLFKDFLSQQIQLTQTRIQVEAHQAPSKSEKQQKNELQKLIKKIA
VQYNLDETIIANGKTLMKFIRGDQSVSFLTGWRYHILKEELENAKQS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaacacaacagcaattaactcactttctcaacaccattgagacacaaacacat
ttggccattgataccgaattcaaacgtattgatactttttatcctattttgtgcttggtg
caaatcgccaccgaaaatgcagttgagtgtattgatattttggccattgaagatctagaa
cctttatttaaaaaactctatcaaacagacagtgtctggattgtgcactcggctcgtcaa
gatattgaggctttatattatctttccaagcgtctaccaacccagctatttgatacacaa
atagcagctcattttctcaatcatcccgcacaaatttcttatcaaaatctcactgaaatt
cttcaaggtgtgattttggacaaggcttatacacgcttagattggaccactcgccctctg
cctgaagcagcacttgaatatgccttggacgatgtgcgctatttgatcaaaaattacgcg
caactgaatgagcaactcacaaccgaggacaagcttgattggcttatgcaagacggttta
gacttatctgatattcgcctatatttgccaaatttggagcaagcttggaaaaaaataaag
ggcttgtcgcgcttaccaaaaagcacgcatcaaaaagcagcacaactggccgcttggcga
gaatcgcaagctattgatcgtaataagcccagaaaatggatcatgagtgatgagcaatta
cttgactacagtctcaaaaaaaccaagctgtctgacgccaatcaatcactttttaaggat
tttttatcgcaacaaatacagcttacacaaacacgtattcaggttgaggcacaccaagca
ccaagcaaaagtgaaaaacaacaaaaaaatgagctgcaaaaactcatcaaaaaaatcgca
gttcagtataatctagatgaaactatcatcgccaatggtaaaacattgatgaaatttatt
cgtggtgatcaatcagttagctttttaactggttggcgctatcatattctaaaagaggag
ttggaaaatgcaaaacagtcttaa
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