Candidatus Thioglobus autotrophicus: SP60_02655
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Entry
SP60_02655 CDS
T04079
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tho
Candidatus Thioglobus autotrophicus
Brite
KEGG Orthology (KO) [BR:
tho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tho03016
]
SP60_02655
Enzymes [BR:
tho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
SP60_02655
Transfer RNA biogenesis [BR:
tho03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SP60_02655
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
NAPRTase_N
Motif
Other DBs
NCBI-ProteinID:
ALE52232
UniProt:
A0A0M4NT94
LinkDB
All DBs
Position
complement(504819..506630)
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AA seq
603 aa
AA seq
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MINSLVAYKGKPARIASVTTHKFDLEFADGATLKVREKDFRFIHPEFVKVNEACAHADIS
VLEEFQEEVLTLQEITEWLFDEYTAQSAWCTCLLVEEGLYFYWQKDSVFVRPSTQVQGIL
DKRMAEKLAAESLQHCIDNLNNNTFDEQDIPYLQEVAKVAFNQSKHAKILDHVGVENNEA
AAYKFLLKIKYFTDSFNPYPARFGIPEDEEIATSLPEIERVDLTHMTCYAIDNEGSNDAD
DAISVDGDKLWIHIADVSVIVDSGSELDEYARERGSNLYLPEQIIHMLPTSITKALALGE
DETSPALSIGLNMSEGIISNIEVVHSRIKVSNTTYEAVDQELELNPDFIQIQTFVSQHKA
FREKSGSISLNLPNVDVRYIDEKVQIEPQKTSPSRDFVAEIMITAGRTISQYAQENDIVM
PYALQDEGDFPQEVLDKKENLSTAESFKAIKFFKRSATSIKPLPHYGLGLDSYLRITSPL
RRYYDLLAHQQLSNFIAGKPTLDKTRVKEIIGINNNALASVGRVTRFSNDHYKCLFLKQN
PSWTGEGVVVDIRGDKALFMIPEVGLMDQIKFKEDQIPKPDDRIMLKVARIDMMERSANF
KPV
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
ttgattaattcactggttgcctataaaggcaagcctgcacgtattgctagtgttacgaca
cacaagttcgacttagaatttgcagacggcgctacccttaaggtcagagaaaaagatttt
cgattcattcaccctgaatttgtcaaggtgaatgaagcctgtgcgcacgcagatattagt
gtcttggaagaatttcaagaagaagtcttaaccctgcaagaaattaccgaatggttgttc
gatgaatacactgcccaaagtgcttggtgtacgtgtcttttggtagaagaaggtttgtat
ttttactggcaaaaggatagtgtttttgtgcgcccaagtacccaagtgcaaggtatttta
gataagcgcatggcagagaaattagccgctgaaagtctacaacattgtatcgataatcta
aacaataatacctttgacgaacaagatattccttacttgcaagaagtggctaaagtagca
tttaaccaatctaaacacgccaaaattttggaccatgttggggtggaaaataacgaagca
gccgcgtataaattcctgctaaaaattaaatatttcactgatagcttcaatccatatcca
gcgcgatttggcattccagaagatgaggaaattgccaccagtttgccagaaattgagcgc
gttgatttaacccatatgacctgttacgcgattgataatgaaggttctaatgatgctgat
gatgcgatcagtgtagatggcgataagttgtggattcatattgctgatgtgtctgtgatt
gttgattctggctcagagcttgacgaatatgcacgtgaacgtggctctaatttatatttg
ccagagcaaattattcacatgctaccaacttctattaccaaggcattggcgcttggtgaa
gacgaaacatcgccggctttatctattgggcttaatatgagtgaaggcattattagtaat
attgaagtagtgcatagtcgtattaaagtgagcaacaccacgtatgaggcagttgatcaa
gagttagagctcaatccagattttatccagattcaaacctttgtgagtcagcacaaagcc
ttccgtgaaaaaagtggctcgattagccttaacctgcctaatgttgatgttagatatatt
gatgagaaagtgcagatagagccacaaaagactagccctagtcgcgactttgtggcagaa
attatgattactgcagggcgcaccatttcacaatatgctcaagaaaacgacattgtgatg
ccgtatgcgctgcaagatgaaggtgatttcccgcaggaagtcttagataaaaaagaaaat
ctaagtacagctgaatcatttaaagcaattaagtttttcaagcgctctgctacttccatt
aagccattacctcattatggtttgggcttggattcttacttaagaattaccagtccacta
agacgttattacgatttattggcgcaccagcaattatcgaattttattgccggcaagccg
acgttggataaaactcgagttaaagaaattattggtattaataacaacgccttggctagt
gttggccgggtaacgcgttttagtaatgatcattacaagtgtttgtttttaaaacaaaac
cctagctggactggtgaaggcgttgtggttgatattcgtggtgataaagctttatttatg
attcctgaagtggggctgatggatcaaatcaaatttaaagaagatcaaattcctaagcca
gatgacagaatcatgctgaaagttgctcgcattgatatgatggagcgttcagcgaatttc
aagccggtttaa
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