Candidatus Thioglobus autotrophicus: SP60_03160
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Entry
SP60_03160 CDS
T04079
Name
(GenBank) DEAD/DEAH box helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
tho
Candidatus Thioglobus autotrophicus
Brite
KEGG Orthology (KO) [BR:
tho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tho03009
]
SP60_03160
Enzymes [BR:
tho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SP60_03160
Ribosome biogenesis [BR:
tho03009
]
Prokaryotic type
rRNA helicases
SP60_03160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
AAA_30
AAA_22
AAA_7
CMS1
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ALE52310
UniProt:
A0A0M5LKT1
LinkDB
All DBs
Position
complement(585166..586539)
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AA seq
457 aa
AA seq
DB search
MSTSDFSSLGLQAGLLKNLSTLGYEQMTPIQALSLPLILEGKDVIGQGKTGSGKTAAFGL
GLLHKLNVKSYKIQSIVLCPTRELADQVASEIRKLARAIHNIKILTLCGGAPFGPQIGSL
EHGAHIVVGTPGRIEEHLRKKTLKLDHVEMLVLDEADRMLDMGFQDAIDDIVEKIPSNRQ
TLLFSATYPQEIEDIAMRVMNNPAVVNAPSTHEASTIKQYFYQTNTDDERMNALRILLAK
HKPDSALVFCNTKLDTQDVADELAHYGFYALAIHGDLDQRERDQALIRFSNKSVSVLVAT
DVAARGLDIDALDMVINFNLAHDPEIHVHRIGRTGRAGRSGIAATLYSDRETRKLDALEI
DISTDELPSDTYLDKPIKKPAMTTLKIDGGKKQKLRPGDIVGGLTGKGGIPGDKIGKITV
SSNWSYVAVESALVKPALKKIQSDKLKGRTFRVRILS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacatcagatttttcctcgttaggtcttcaagctggtttgttaaaaaaccttagt
accctaggttatgaacaaatgaccccgattcaggcgcttagcctgcctttgattctagag
ggtaaagatgtgattggtcaaggcaagacgggctctggaaagacggcggcttttggtttg
gggcttttgcataagttgaatgttaagtcatacaagattcagtcaattgttttgtgtccg
actcgagagttggccgatcaagtggcaagtgaaattcgaaaattagccagagccattcac
aatattaagattttaacgctttgtggtggcgcgccatttggcccgcaaattggttcgcta
gaacatggtgcacatattgttgtgggtacgcctgggcgtattgaggagcatttacgtaaa
aaaacactcaagcttgatcatgttgaaatgttagtgcttgatgaggcagatcgcatgctg
gatatgggctttcaagatgcgattgatgacattgttgaaaaaatccctagcaatcgacaa
actttgttgtttagtgcgacttatccgcaagaaattgaagatattgctatgcgtgtgatg
aataatccagccgtggtgaatgcgccctcaacgcatgaagcttcaaccattaaacaatat
ttttatcaaaccaatacagatgacgagcgtatgaacgctttgcgtatattgctagcaaag
cataagcctgattcagctttggttttttgcaatactaagcttgacacacaagacgtggct
gatgaattagctcattacggcttttatgcgctggccattcatggtgatcttgatcagcgt
gagcgcgatcaggcattgattcgattttctaataagagtgtatcagttttggtggctacc
gatgtggcagcacgcggcttagatattgatgcattagatatggtgattaactttaatctt
gctcatgatcctgagattcatgttcatcgtatcggccgtactgggcgagcggggcgtagt
ggtattgcagccactctttatagtgacagagaaactagaaaattagacgctttggaaatt
gatattagtacagatgagctgccgagtgatacttatcttgataagccgattaaaaagcca
gcaatgaccactctaaagattgatggcggcaaaaaacaaaaactccgccctggcgatatt
gtgggcggcctaacaggtaagggcggcattcctggcgacaaaattggcaaaattacagtt
tctagcaattggtcttatgttgcagtagagtctgcattggtaaagcccgctttaaagaaa
attcaaagcgacaagcttaaaggtagaacatttagagtgagaattctttcttaa
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