Candidatus Thioglobus autotrophicus: SP60_04340
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Entry
SP60_04340 CDS
T04079
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tho
Candidatus Thioglobus autotrophicus
Brite
KEGG Orthology (KO) [BR:
tho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tho03016
]
SP60_04340
Enzymes [BR:
tho01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SP60_04340
Transfer RNA biogenesis [BR:
tho03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SP60_04340
Prokaryotic type
SP60_04340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ALE52510
UniProt:
A0A0M5LHJ5
LinkDB
All DBs
Position
809484..810395
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AA seq
303 aa
AA seq
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MSRRNPKGRDINGIVLLDKDTGLSSNAALQKVKRLFSAKKAGHTGSLDPLASGILPICLG
QATKVAQFLLDDNKRYFVRGKLGENTDTLDCEGEVVQTQEHKHLSEATIKKATMSFVGDI
LQIPPMYSALKKDGQPLYKLARQGIEIERPPRPVTIHNIDFISYDKGIITLDVSCSKGTY
IRSLIQDIGNQLGCGAHVIELRRTGFAHIDISETIKFSELETLVTEDFKSLDAYIFPSEQ
MLPNIQNVSLDVQQTIDIKYGRSILSEQKTEQHTVKLFDPQQQFLGIGELTPDGVIAPKR
LFV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggcgcaacccaaagggcagagatattaatggtattgtcttgttggataaagac
accggactaagctccaatgccgccctacaaaaggttaaacgacttttttctgctaaaaaa
gcagggcatacaggtagtttagatccgcttgctagtggcattttgccgatttgtctaggt
caggcaaccaaggtggctcaatttttacttgatgataataagcgctattttgttcgtggc
aagctgggggagaataccgatacgctcgactgtgagggggaagttgtgcaaacccaggaa
cataagcacttaagcgaagcgactatcaaaaaagccaccatgagttttgttggcgacatc
ttgcaaattccacccatgtattcagcactaaagaaagacggccaaccgctgtataaacta
gcacgccaaggtattgagattgagcgcccgccccgccccgtaactattcataatattgat
tttatcagctatgacaaaggcattatcaccctagatgtgagttgctctaagggtacttat
attcgtagtttaattcaagatattggtaatcagctgggctgtggtgcgcatgtcattgag
cttaggcgtacagggtttgcgcatattgatattagtgaaaccattaaattttctgaacta
gagacgcttgttactgaagattttaaatctctcgacgcgtatatttttcccagtgaacag
atgttgcctaatattcaaaatgttagcttagatgtgcaacaaactatagatattaaatac
gggcgaagcattctttcagagcaaaaaactgagcagcatacggttaaattgtttgatcct
caacaacagtttttaggcattggcgaattaacaccagatggtgtcattgcacccaaacgt
ctttttgtttaa
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