Candidatus Thioglobus autotrophicus: SP60_04545
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Entry
SP60_04545 CDS
T04079
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tho
Candidatus Thioglobus autotrophicus
Pathway
tho03030
DNA replication
tho03410
Base excision repair
tho03420
Nucleotide excision repair
tho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SP60_04545
03410 Base excision repair
SP60_04545
03420 Nucleotide excision repair
SP60_04545
03440 Homologous recombination
SP60_04545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tho03032
]
SP60_04545
03400 DNA repair and recombination proteins [BR:
tho03400
]
SP60_04545
Enzymes [BR:
tho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SP60_04545
DNA replication proteins [BR:
tho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SP60_04545
DNA repair and recombination proteins [BR:
tho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SP60_04545
NER (nucleotide excision repair)
GGR (global genome repair) factors
SP60_04545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ALE52547
UniProt:
A0A0M4P937
LinkDB
All DBs
Position
843169..845895
Genome browser
AA seq
908 aa
AA seq
DB search
MSHKLILLDGSAFLFRAYFSTLKQHLSNQEGFPTGAMFGVVNAIKRLQRQYPEAKLIAIF
DAKGKNFRHELYPQYKAHRKPADDDLVMQIEPLYEIIRAMGFHFMCVPGVEADDVIATLS
RCADQHSIKTMIASGDKDLMQLVSENISQLDMTGSTYNRDGVIEKMGVAPEKILDLLALT
GDSADNIPGVPSVGPKTAIKWLQAYRDLDGIKENAHEIKGKVGEKLRDNFDLLDLSHRLV
SLKFDVDLPCNILESEPGEDSAKLADLYLQYGFSMWHKQLGDVDTSSANETAEQPHEVSK
PAQSLLEGYSQTTVLDEAIFTTMVERLKRCKRFVVDLETNSLDYMNAKIVGWVFLIERDS
FYIPVAHDYLDAPKQLDFSKVMETLKPILEEASIGKVGQNLKYDAHVLANYQIDLNGITD
DTMVKSYVLNSVATRHNMDDLSEHYLNHQTIAFSEVAGKGKKQITFNQVSLEVASPYACE
DVIVTDLLNQVLDENLAQYPKLVKLYQRIELPMVKVLLAVERNGVKLDVSSLSMQQLEVK
SQMDRIQAQAYELAGEVFNLESPKQIQQILFSEEGLGLEPKKKTPKGAPSTNEEALKLLD
HPLVDLILSYRTLTKLNSTYLEALPKQIDLHTQRLHTSYHQAVTATGRLSSSNPNLQNIP
IRSELGARIRGAFVASEGCVIIAADYSQIELRIMAHISQDVNLLDAFKHDQDVHSATAAT
MFKVAIDEVTKEQRRRAKAINFGLIYGMSAFGLAKQIDVSRTEAKEYIDAYFENYPGVAQ
YMEDTRESAKIQGYVETIMGRRLYLPQINAKNKMLQQHALRTAINAPMQGSSADIIKKAM
LDVHDWIGKNNNDIKMIMQVHDELVFEVSADQVEVFSQKIKDLMEGAVLLDIPLKVDVGT
GNSWQQAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgtcacataagctcatattactagatggctcggcttttttgttccgcgcctacttctct
acactcaaacagcacctaagcaatcaagagggttttccaacgggtgccatgtttggcgtg
gtaaacgccattaagcgtttgcaaagacagtaccctgaagccaagctaattgctattttt
gatgctaaaggtaaaaactttcgtcatgaactctatccgcaatacaaagcccacagaaag
ccagcagatgatgatttagtgatgcaaatcgagcctttgtatgagattattcgcgctatg
ggttttcattttatgtgtgtacctggcgtagaagcagacgatgttattgccacgttgagt
cgttgcgctgatcagcatagtattaaaaccatgattgccagtggtgataaagatttaatg
cagctggtgagtgaaaatatctctcaattagatatgactggcagtacttataatcgcgat
ggtgtgattgaaaaaatgggtgtcgcacctgagaagattttagatctattggcgcttacg
ggtgatagtgctgacaacattcctggcgtaccaagtgttggccccaaaacggctatcaaa
tggcttcaggcatatcgagatcttgacggcattaaagaaaatgcacatgagattaaaggt
aaagtgggcgaaaagctacgcgacaatttcgatttattagacttatctcaccgattggtg
agtctgaaatttgacgtagacttaccttgtaatattttagaaagcgagccaggtgaggat
agtgctaaattagctgatttgtatctgcagtatgggttttccatgtggcataagcagtta
ggagatgtggatacttcttctgcgaatgaaactgccgaacagccgcatgaagtctctaag
cctgcacaaagtttactagagggttattcacaaaccactgtattagatgaggcgatattt
accactatggtcgagcgcctcaagcgctgtaagcgttttgtggtagatttggaaaccaac
tcgctggattacatgaatgccaaaattgtaggctgggtctttttaattgaacgcgatagt
ttttatatccctgttgctcatgattatttagacgcacctaagcaattggacttttccaag
gttatggaaacgctaaaacctattttggaagaagcgagtattggcaaggtagggcaaaat
ctcaaatatgatgcccatgttttggccaattatcaaattgatttaaacggcattacagat
gacacaatggttaagtcgtatgtgttaaattcagtagcaacacgccacaatatggacgat
ttgtctgagcattacctgaaccaccaaaccattgcgttttctgaggtagccggcaaaggt
aaaaaacaaattacctttaatcaagtatcgttagaggtggctagcccttatgcttgcgaa
gatgtgattgtgacagatttactcaatcaggtgttggatgagaatttggcccagtatcct
aagttggttaagctatatcagcgtattgaactgccaatggttaaggtgttattggcggtc
gagcgcaatggtgttaagctagatgtgagctcgttgagtatgcaacaactagaggtaaaa
tctcagatggatcgcattcaagcgcaagcatacgagcttgcaggtgaggtgttcaaccta
gaatcacctaagcaaatacagcagattttgttttctgaagaaggcttgggtttggagccg
aaaaagaaaacaccaaaaggtgcaccctctaccaatgaagaggcgcttaagttgctagac
catcctttagttgatttgattttgagctatcgaaccctaaccaagctcaactctacttat
ttagaagcactacccaagcaaattgatttgcatactcagcgactacacacctcttatcat
caggcagtgacagcgacagggcggctatcttcgtctaatccaaatttgcaaaatattcct
attcgatctgagctgggtgcacgtattcgtggcgcctttgtggctagtgaaggctgtgtg
attattgctgcggattattctcaaattgagctaagaattatggcgcatatctcccaagat
gttaatttattagacgcttttaagcatgatcaggatgtgcatagtgcgaccgctgccacc
atgtttaaagtggctattgatgaagtaaccaaggagcaacgtcgtcgagctaaggcgatt
aattttggcctgatttatggcatgagcgcttttggtttggccaagcaaatcgatgtttca
cgcacagaggctaaagaatatattgatgcctattttgagaactatccaggcgtggctcag
tacatggaagatacgcgagaatctgctaagattcaaggctatgttgagacaattatgggc
aggaggttgtatctgccacagattaatgctaagaataaaatgctacagcagcatgcacta
agaacagcgattaacgcaccaatgcagggctcaagtgctgacattattaaaaaagccatg
ctggatgtgcatgactggattggtaaaaataataacgacatcaaaatgattatgcaagtg
catgatgagttagtttttgaagtgagtgctgatcaagtagaggtgttttctcaaaaaata
aaagacttaatggagggtgctgttttgctcgatatccccttaaaggtggatgtcggcacg
ggcaactcttggcaacaagcacactaa
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