Candidatus Thioglobus autotrophicus: SP60_04700
Help
Entry
SP60_04700 CDS
T04079
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tho
Candidatus Thioglobus autotrophicus
Pathway
tho00300
Lysine biosynthesis
tho00470
D-Amino acid metabolism
tho01100
Metabolic pathways
tho01110
Biosynthesis of secondary metabolites
tho01120
Microbial metabolism in diverse environments
tho01230
Biosynthesis of amino acids
Module
tho_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tho00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SP60_04700
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SP60_04700
Enzymes [BR:
tho01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SP60_04700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
ALE53235
UniProt:
A0A0M3TUN5
LinkDB
All DBs
Position
875427..876608
Genome browser
AA seq
393 aa
AA seq
DB search
MDRYGSPLYVYSRTDIENNWREFDSAFGDHPHLVCYAVKANSNIAVLNVLAKIGAGFDIV
SIGELERVLAAGGQASNCVFSGVAKTQVEIKRGLEAGIRCFNVESAAELGRIEQVASGMN
VQAPISIRVNPNVDAKTHPYISTGLKENKFGVDIDDALVLYKTAQQSKYLSIKGLDCHIG
SQLTDVSPFLDALDKVLGLIEILKNQGIDIEHLDLGGGVGIVYDDETTIDIAAYIAAVLK
KVGNLEIILEPGRAIVGNAGAFITKVEFLKRNSDKSFAIIDGAMNDLLRPAFYNAYHQVL
PVRENAQGIESNWDLVGPICETGDFLAKDRVLSLSEGDYLAIMSAGAYGFTMSSNYNSRP
RVAEVMVSDNTHHLIRKRETIQDLFNTEILIND
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttacggctcgccgttatacgtttattcacgaactgatattgaaaataattgg
cgtgagtttgattcggcttttggcgatcatccgcacttggtgtgttacgcagttaaagct
aattctaatattgccgtgcttaatgtgctggctaaaattggcgccggatttgacattgtt
tcaattggcgaattggaacgtgttttggcagcaggtggacaagcctcaaactgtgtattt
tcaggtgttgccaaaacgcaggtggaaatcaaacgtggcctcgaggctggcattcgttgc
tttaatgtggaatctgctgcagagttagggcgtattgaacaagtggcgagtggcatgaat
gtgcaagcgccaatttccattcgcgtcaatccgaatgtggacgcaaaaacacatccatat
atttctacaggcctaaaagaaaacaaatttggcgtggatattgacgatgcgctcgtactc
tataaaacggcgcaacaatccaagtatttgtcgattaaaggtttggactgtcacattggc
tcccagctcactgatgtatcgccatttttagatgcactggataaggtactgggtttgatc
gagatacttaaaaaccaaggtattgacatcgaacacctagatttaggcggcggtgttggc
attgtctatgatgatgaaacgacaatcgatattgctgcttatattgctgcagttttaaag
aaagttggaaatttagaaattatattggagccaggacgcgctattgtcggtaatgcgggc
gcctttatcaccaaagttgagtttctaaagcgaaattcagacaagtcgtttgcgattatt
gatggcgcgatgaacgacttattacgacccgctttttacaatgcctatcatcaagtgttg
cctgtgcgtgaaaatgctcagggaattgagtctaattgggacttggtaggtccgatttgc
gaaaccggtgattttttagccaaagatagggtgctgtctttatctgagggcgattatctc
gccattatgtctgcaggcgcgtacggttttaccatgagttctaattacaattcccgaccc
cgtgtagcggaggtaatggtgtcagataatacacatcacttgattcgcaagcgggaaacc
attcaagatttatttaatacagagatactaatcaatgactaa
DBGET
integrated database retrieval system