KEGG   Candidatus Thioglobus autotrophicus: SP60_04730
Entry
SP60_04730        CDS       T04079                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K03086  RNA polymerase primary sigma factor
Organism
tho  Candidatus Thioglobus autotrophicus
Brite
KEGG Orthology (KO) [BR:tho00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    SP60_04730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tho03021]
    SP60_04730
Transcription machinery [BR:tho03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SP60_04730
SSDB
Motif
Pfam: Sigma70_ner Sigma70_r3 Sigma70_r2 Sigma70_r1_1 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: ALE52576
UniProt: A0A0M4NIZ0
LinkDB
Position
complement(879695..881509)
AA seq 604 aa
MKSTTKAHKQALQKLITVGKEKGYLTYSEINDILPEDLLTQEQVEPIVTILEELDITVSD
SVPDADTLVVESGAKAQSTSAEAAVAALAALDSEFGRTTDPVRMYMREMGVVDLLDQEDE
IRIAKEIEAGVFEIMQAITLYPSITDYFFKAHKRLEEGKCKMTDVIIGYQGDAADFEAKK
AAFDAGEFDDDEEYEDMEEMEYTGPDEDKIYTRFETVLSCSQGYQELNEKHGFRHKKTVA
AREQLSKGLSDLRLAPKLVSTMMEVICDRVAQIKKQEKVIQNACLYAGMERAQFFEIFAG
NETNYDWLKNAKLDEKLASALDSVKDEIFYAQKNLHEYEEEMQLTVAELKALNKLYRKGD
RRAKKAKSQMIEANLRLVISIAKKYANRGLQFLDLIQEGNVGLMKAVDKFEYRRGYKFST
YATWWIRQAITRSIADQARTIRIPVHMIETINKLNRVRRQLLQKFGREASPEELAVEMEL
PEYKIIKILKIAKEPLSMETPVGDDEDSNIGDFIEDTNLSSPVEITTKESLRETTGDLLA
NLSPREAKVLKMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRHPSRAHKLQS
FLDS
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgaaatctactacaaaagcacacaagcaagcactacaaaaacttattacagttggtaaa
gagaaaggctatttaacctactctgaaattaacgacatcttgcctgaagacttactaacg
caagaacaagtagagcctattgttaccattttagaagaactcgatattacagtttctgac
tcagtgcccgatgctgacaccttggttgtagaatcgggcgctaaagctcaatctacttct
gcagaagcagctgtcgctgcactagccgctcttgattctgaatttggacgaacaaccgat
ccagtcagaatgtacatgcgtgaaatgggtgttgtagatctattagatcaagaagatgaa
attcgcattgccaaagaaattgaagccggcgtgtttgaaattatgcaagccattacgctt
tacccatcaatcactgattacttcttcaaggcgcataaacgtctagaagaaggcaagtgt
aaaatgaccgatgtgatcattggctaccaaggtgacgcggcagattttgaagccaaaaaa
gcggccttcgatgccggcgagtttgatgatgacgaagagtacgaagacatggaagaaatg
gaatatacaggccctgatgaagataagatatatacccgttttgaaaccgttttaagctgc
tctcaaggctaccaagaactcaatgaaaaacacggctttcgccacaaaaaaaccgtggct
gcacgtgagcaactatccaaaggcttatcggacttacgcctagcaccaaaattggtttca
accatgatggaagttatttgtgatcgtgtcgcccagattaaaaaacaagaaaaagttatc
caaaatgcctgtctttatgcgggcatggaaagagctcagtttttcgagatatttgctggc
aatgaaaccaattatgactggctcaaaaatgcaaaattagacgaaaaacttgcctcagca
cttgattcagttaaagatgaaatcttctatgcgcagaaaaatttgcatgagtatgaagaa
gaaatgcaactcacagttgccgaactaaaagcgcttaataaactctaccgcaaaggtgac
cgacgcgctaaaaaggccaaatcacaaatgattgaggccaatctaagattggttatttcg
attgccaaaaaatacgcaaatcgtggcttgcagtttttagacctaattcaagaaggcaat
gttggcctgatgaaagcagttgataagtttgagtatcgtcgtggttataaattctcaacc
tacgcaacttggtggattcgccaagctattacacgttcaattgccgaccaagcacgcacg
attcgtattccagtgcacatgattgaaaccattaacaagctcaatcgcgtacgtcgtcaa
ttattacaaaaatttggtcgtgaagcttctccagaagagttggctgttgaaatggagttg
ccagaatacaaaattatcaaaattttaaaaattgccaaagaacctttgtcaatggaaact
ccagtgggtgacgatgaagactccaacattggtgactttattgaagataccaacttatct
tcaccagtggaaattaccaccaaagaaagtctcagagaaacaacaggcgacctgctagcc
aacctatctcctcgtgaagcaaaagtactcaaaatgcgctttggtattgacatgaacacc
gatcacacgctagaagaagtaggccgacaattcgatgtaacacgtgaacgtattcgtcaa
attgaagccaaagcgctgagaaaattacgacacccttctcgtgcccataaacttcaaagc
tttttagattcttaa

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