Candidatus Thioglobus autotrophicus: SP60_04730
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Entry
SP60_04730 CDS
T04079
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
tho
Candidatus Thioglobus autotrophicus
Brite
KEGG Orthology (KO) [BR:
tho00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SP60_04730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tho03021
]
SP60_04730
Transcription machinery [BR:
tho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SP60_04730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ALE52576
UniProt:
A0A0M4NIZ0
LinkDB
All DBs
Position
complement(879695..881509)
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AA seq
604 aa
AA seq
DB search
MKSTTKAHKQALQKLITVGKEKGYLTYSEINDILPEDLLTQEQVEPIVTILEELDITVSD
SVPDADTLVVESGAKAQSTSAEAAVAALAALDSEFGRTTDPVRMYMREMGVVDLLDQEDE
IRIAKEIEAGVFEIMQAITLYPSITDYFFKAHKRLEEGKCKMTDVIIGYQGDAADFEAKK
AAFDAGEFDDDEEYEDMEEMEYTGPDEDKIYTRFETVLSCSQGYQELNEKHGFRHKKTVA
AREQLSKGLSDLRLAPKLVSTMMEVICDRVAQIKKQEKVIQNACLYAGMERAQFFEIFAG
NETNYDWLKNAKLDEKLASALDSVKDEIFYAQKNLHEYEEEMQLTVAELKALNKLYRKGD
RRAKKAKSQMIEANLRLVISIAKKYANRGLQFLDLIQEGNVGLMKAVDKFEYRRGYKFST
YATWWIRQAITRSIADQARTIRIPVHMIETINKLNRVRRQLLQKFGREASPEELAVEMEL
PEYKIIKILKIAKEPLSMETPVGDDEDSNIGDFIEDTNLSSPVEITTKESLRETTGDLLA
NLSPREAKVLKMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRHPSRAHKLQS
FLDS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctactacaaaagcacacaagcaagcactacaaaaacttattacagttggtaaa
gagaaaggctatttaacctactctgaaattaacgacatcttgcctgaagacttactaacg
caagaacaagtagagcctattgttaccattttagaagaactcgatattacagtttctgac
tcagtgcccgatgctgacaccttggttgtagaatcgggcgctaaagctcaatctacttct
gcagaagcagctgtcgctgcactagccgctcttgattctgaatttggacgaacaaccgat
ccagtcagaatgtacatgcgtgaaatgggtgttgtagatctattagatcaagaagatgaa
attcgcattgccaaagaaattgaagccggcgtgtttgaaattatgcaagccattacgctt
tacccatcaatcactgattacttcttcaaggcgcataaacgtctagaagaaggcaagtgt
aaaatgaccgatgtgatcattggctaccaaggtgacgcggcagattttgaagccaaaaaa
gcggccttcgatgccggcgagtttgatgatgacgaagagtacgaagacatggaagaaatg
gaatatacaggccctgatgaagataagatatatacccgttttgaaaccgttttaagctgc
tctcaaggctaccaagaactcaatgaaaaacacggctttcgccacaaaaaaaccgtggct
gcacgtgagcaactatccaaaggcttatcggacttacgcctagcaccaaaattggtttca
accatgatggaagttatttgtgatcgtgtcgcccagattaaaaaacaagaaaaagttatc
caaaatgcctgtctttatgcgggcatggaaagagctcagtttttcgagatatttgctggc
aatgaaaccaattatgactggctcaaaaatgcaaaattagacgaaaaacttgcctcagca
cttgattcagttaaagatgaaatcttctatgcgcagaaaaatttgcatgagtatgaagaa
gaaatgcaactcacagttgccgaactaaaagcgcttaataaactctaccgcaaaggtgac
cgacgcgctaaaaaggccaaatcacaaatgattgaggccaatctaagattggttatttcg
attgccaaaaaatacgcaaatcgtggcttgcagtttttagacctaattcaagaaggcaat
gttggcctgatgaaagcagttgataagtttgagtatcgtcgtggttataaattctcaacc
tacgcaacttggtggattcgccaagctattacacgttcaattgccgaccaagcacgcacg
attcgtattccagtgcacatgattgaaaccattaacaagctcaatcgcgtacgtcgtcaa
ttattacaaaaatttggtcgtgaagcttctccagaagagttggctgttgaaatggagttg
ccagaatacaaaattatcaaaattttaaaaattgccaaagaacctttgtcaatggaaact
ccagtgggtgacgatgaagactccaacattggtgactttattgaagataccaacttatct
tcaccagtggaaattaccaccaaagaaagtctcagagaaacaacaggcgacctgctagcc
aacctatctcctcgtgaagcaaaagtactcaaaatgcgctttggtattgacatgaacacc
gatcacacgctagaagaagtaggccgacaattcgatgtaacacgtgaacgtattcgtcaa
attgaagccaaagcgctgagaaaattacgacacccttctcgtgcccataaacttcaaagc
tttttagattcttaa
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