Candidatus Thioglobus autotrophicus: SP60_06070
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Entry
SP60_06070 CDS
T04079
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tho
Candidatus Thioglobus autotrophicus
Pathway
tho03030
DNA replication
tho03430
Mismatch repair
tho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SP60_06070
03430 Mismatch repair
SP60_06070
03440 Homologous recombination
SP60_06070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tho03032
]
SP60_06070
03400 DNA repair and recombination proteins [BR:
tho03400
]
SP60_06070
Enzymes [BR:
tho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SP60_06070
DNA replication proteins [BR:
tho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SP60_06070
DNA repair and recombination proteins [BR:
tho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SP60_06070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ALE52804
UniProt:
A0A0M4PNN7
LinkDB
All DBs
Position
1121045..1124482
Genome browser
AA seq
1145 aa
AA seq
DB search
MSNSGFCHLHCQSEFSVVNSLIRIPKLIDSAVELGMDSVALTDESNLYAAVKFYQKAISA
NIKPIFGARINVVDEEGEFYSILLLCQNHQGFLNLSELISLSYMQEQSLEGVSISEAQLE
AHHEGLLLIATPVYSDVAKHLLNNQILEAQQKASHWRKVFNNRYYLAVQRTSREFDERHL
HLCINLALELDIAVVATNDVQFLVKDDFDAHEARICISQGGLLDDARRTRHFSDQQYLKS
VAQMQSLFSDLPEVLKNTVEVSQRCNVHFELHQKNYLPDFPIPEGLSIAEFFTLESERGL
ASRLQGLEVDKAEYEARLKFELDVIIQMDFPGYFLIVADFIQWSKDNDIPVGPGRGSGAG
SLVAYVLGITNVDPIKHELLFERFLNPERVSMPDFDIDFCTDRRDEVIDYVAKKYGREKV
SQIITYGTMAAKGVVRDVGRVLGHPYGFSDKISKLIPNDLKMTLDKALMPESEGGSDDLL
ARYGSEEAVTDLINLSKKLEGVVRNVGTHAGGVVIAPSKISDFCPVYKGSGENDGVVSQF
DKDDVEAVGLVKFDFLGLSNLTVIQKAIKMIEAKGLSDSKIDLDSLPLDDEKVYELLQRC
DTTGIFQLESDGMRSYLKKLQADNFEDIVAMLALYRPGPLDAGMVDDYINVKHGAQVKYP
HPMLEEILAPTNGVFLYQEQVMKSAQVMAGYSLGGADLLRRAMGKKKVEEMDRQRSVFVE
GAAEKNIDEKKANEIFDLIDKFSGYGFNKSHSVAYAYVSYHTAWLKSHYPAPFMAAVLSG
MMDDTDRVSFTVGEIIHMGLRVNGPNVCESDYQFSIADDKTVVYGLGAIKGVGEALVERL
MAERQANGVFKDLFDFCFRIEKRYLNKRALEALIYSGALDVFDVSRASLIKTYPVAVKQA
EQRQNDHSSGQSGLFSVVEEHVEYEVHYLNAPDFAFRQRLQLEKMVMGYYFYDHPTDEYK
TDTRHINAVLPSEIRFRNNKDVRVLALISELRYRPTRKGGQIAIVEVEDGSVSLNAVVFS
KSLGEVSDKLIVDDVVIISGKIQRDDYRDGWQIIVDKIENINEVKMNYAKGFEVRLDHQH
QAIFHKIHQLLGEHKGSCPVKISYNTERLKGSIPLSKELSVNPEQSLVDALNALTLTQAS
KIHYH
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattctggtttttgccatctacactgtcaaagtgagttttcagtcgttaactcc
ttaatacgtataccaaaattaatcgattcagcggttgaactaggcatggatagtgtggcg
ttaacggatgaatctaatttatatgctgcggttaaattttaccaaaaagcaatttccgcc
aatattaaacctatttttggcgcacgtattaatgtcgtagatgaagaaggtgagttttat
tcaattttattattgtgtcaaaatcatcaaggttttttaaacttatcagagcttatttcc
ctatcttatatgcaagagcaatcgctcgaaggtgtatcaattagtgaggcgcaacttgaa
gcgcatcatgaaggattgcttctaattgccactcctgtttatagtgacgttgccaagcat
ttattgaataatcaaattttggaggcgcagcaaaaagcctctcattggcgtaaggttttt
aataatcgatactatcttgcggtacaaagaacttctagagagtttgacgagcgccacctg
catttgtgtattaatttagcattggaattagatattgctgttgttgcaactaacgatgtc
caatttcttgttaaggatgattttgatgcccatgaggcgcgtatttgtatttcacaaggc
ggactgttagatgatgcacgtcgtacacgccatttttctgatcaacaatacttgaagtca
gttgcacaaatgcaaagtctattctccgatttgcctgaggtgctgaaaaataccgtagaa
gtttcacaacgctgtaatgttcattttgagcttcaccagaagaattatttgccagatttt
cctattcctgaagggttgagtattgctgaatttttcactcttgagtctgagcgtggacta
gcttctcgcctgcaagggttggaggtggataaggctgagtatgaagcaaggcttaagttt
gagttagacgttattattcagatggactttcctggctattttctaattgtggctgatttc
attcagtggtctaaagataacgatattcctgttggccctggacgaggttctggtgctgga
tctttagttgcctatgtactaggtattaccaatgtcgatcctattaaacacgagctatta
tttgagcgatttttaaatcctgagcgtgtttctatgcccgattttgatattgatttttgc
acggataggcgtgacgaagttattgattatgtggctaaaaaatatggtcgtgagaaagta
tctcaaattattacctacggtacgatggcggctaaaggtgtggtgcgcgatgttgggcgt
gtactcggccatccttatggctttagtgacaaaatatctaagctaatccctaatgacttg
aagatgacccttgataaggcattaatgccagaatcggaaggagggtctgatgatcttttg
gcgcgctacggctctgaggaagcggtcacggatttgattaatctatctaaaaaactagag
ggtgtggtgcgtaatgtgggtacgcatgcgggtggcgtggtgattgccccaagtaagatt
agtgatttttgccctgtttataaaggctcaggcgagaatgatggtgtggtgtctcagttt
gataaagatgatgttgaagcggtcggtttggttaagtttgactttttaggtttgtcaaat
ttaaccgttattcaaaaagccatcaaaatgattgaagcaaagggattgagtgatagcaaa
atcgaccttgatagcttgccgttggacgatgaaaaagtctatgaattattgcaacgttgc
gatacgacgggtatttttcagttagagtctgatggcatgcgtagttatttgaaaaaacta
caggctgacaactttgaagatattgttgctatgttggccttgtatcgtccaggtccatta
gatgcgggcatggtagatgactatattaatgttaagcatggtgctcaggttaagtatcca
catcctatgttagaagagattctagcaccaaccaatggtgtatttttatatcaagagcag
gtgatgaaatctgcccaagtcatggctggttattcgctaggtggtgcggacttattacgt
cgtgctatgggcaaaaagaaagtagaagagatggatcgtcagcgtagtgtttttgtggaa
ggtgctgctgaaaaaaatattgatgagaaaaaagcaaatgaaatttttgatctgattgat
aaattctcaggatatgggtttaataaatcacactcggttgcgtatgcttacgtttcttat
catacagcttggctgaaatctcactatcctgcaccttttatggcggcagtattatcaggc
atgatggatgacacggatcgagtgtcgtttacagtaggtgaaattattcacatggggctg
agagttaatggcccgaatgtttgtgagtctgattatcaatttagtattgcagacgacaaa
acagtcgtttatggtttgggtgccattaaaggtgtgggtgaagctttggttgaaagactg
atggcagagcgtcaggctaatggtgtttttaaagatttgtttgatttctgttttagaatc
gaaaagcgctatttgaataaacgcgcactagaggcattaatttatagtggcgcattagat
gtatttgacgtttcaagagcaagtttgattaagacttacccagtagctgtcaaacaggca
gaacaacgtcaaaatgatcattctagtggccagagtggtttgttttctgttgtggaagag
catgttgagtatgaagtacattatttaaacgcaccagactttgcttttcgacaacgcttg
caattagaaaaaatggttatgggttattatttttatgatcacccaactgacgagtacaaa
actgataccaggcatattaatgctgtactaccttctgaaatacgctttaggaataataaa
gatgtgcgtgtgctggcgttgatttctgagttgcgctatcgacccactcgaaaagggggt
cagattgccattgtggaagttgaagatggtagcgtgtcattgaatgctgtggttttttca
aagtctctaggtgaggtaagcgacaagcttattgtagatgatgtggttattatttcaggc
aagattcagcgcgatgattatcgagacggctggcagattattgtagataaaatcgaaaat
attaacgaagtaaagatgaattatgccaaaggttttgaagttaggcttgatcatcagcat
caagctatttttcacaaaattcaccagcttctaggtgaacataaaggcagttgtccagtt
aaaatttcttataatactgagcgcttaaaaggtagcataccattgagcaaagagcttagt
gttaacccggagcaatcattagtcgatgcgcttaatgcactaaccttaacccaggctagt
aagattcattatcattaa
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