Thermosipho sp. 1063: BG95_01125
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Entry
BG95_01125 CDS
T04625
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
thp
Thermosipho sp. 1063
Pathway
thp03030
DNA replication
thp03410
Base excision repair
thp03420
Nucleotide excision repair
thp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BG95_01125
03410 Base excision repair
BG95_01125
03420 Nucleotide excision repair
BG95_01125
03440 Homologous recombination
BG95_01125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thp03032
]
BG95_01125
03400 DNA repair and recombination proteins [BR:
thp03400
]
BG95_01125
Enzymes [BR:
thp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BG95_01125
DNA replication proteins [BR:
thp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BG95_01125
DNA repair and recombination proteins [BR:
thp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BG95_01125
NER (nucleotide excision repair)
GGR (global genome repair) factors
BG95_01125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Acyl-CoA_ox_N
Motif
Other DBs
NCBI-ProteinID:
APT71588
UniProt:
A0A1L7BDC5
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All DBs
Position
complement(224372..227038)
Genome browser
AA seq
888 aa
AA seq
DB search
MANLFLFDGTGLVYRAFYAIDQSLKTSTGKHTNAVYGIAKMLIKFFKEHININKDACAFV
LDSKGGSQKRKELLIEYKANRPETPKLIIEQLPYIEEFVESFGLRVLKLMGYEADDIIAT
LAKKFYDDFEQINIITGDKDLLQLVDDKIFVWRIERGITDLVLYDKSKVYEKYGIYPYQF
ADYLSLVGDQIDNIPGVKGIGKKTATSLLKKYGSLDNVIKNKKLLTNKLQKLLENSKENL
TLSRELVELIYDVPLNLKAEDLIYKGYNQKKLLQVLKNFEFSSIVKELNLQEEFEKEYIV
VDNLKKLEKLQDEIKKMKVFSIDTETTSLEPYSAKLVGISVATKEGKAYYIPVSHVNGKN
FEKKYVLKFLKEILESGEFNIVGQNLKFDYKIFKLFGIDPHPPYFDTMVAAYLLNPDERK
YNLEELSLKFLGYKMISFDELVDGSVPLFGNDFSFVPIEKAAEYSCEDADITFRLFHILS
KHISEIKDLFYNIEMPLINVLAQMELNGVYFDLDYLKILSEKYEQRMRRLEEKIYEISGE
RFNINSSKQVAEVLFNKLKLPSIKKTSTGRDSTNAEVLEELAKEYEIAQLLLEHRKYQKL
KSTYIDSIPNSVNDITKRVHSSFHQTGTATGRLSSSEPNLQNLPTRTEEGREIRKAVKPQ
FEDWYIVGADYSQIELRILAHMSGDEKLLEAFKNNYDIHTITAANIFNISELMVTEDMRR
MGKMVNFAIIYGISPYGLSKRIGLNVNETKKIIDSYFKYYNGVFDFIKQTVEFAKKNGFV
KTLFGRKRYIPQLRSKNVRQEGERIAINTPIQGTAADIIKIAMINIHNELLRRKLKTKMI
LQVHDELVFEVPKEELEIVKEIIVDKMENSVKLKVPLKVDLYEGKEWE
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatctgtttctctttgatggtacaggtttagtttatagggcgttttatgcaata
gatcaatctttaaagacttctacaggaaagcatacaaatgcagtatacggaattgcaaag
atgttaataaagttttttaaagagcatatcaatattaataaagatgcttgtgcttttgtt
ttagattcaaaaggaggaagtcagaaaagaaaagaacttttgattgaatacaaagcaaat
aggcctgaaacccccaagcttataattgaacaacttccgtatatagaggaatttgtggaa
agttttgggttaagagtgttaaaattaatgggatacgaagcggatgatattatcgcaaca
cttgcaaaaaaattttacgatgattttgaacagataaatataataacaggtgacaaagat
ttattgcagcttgttgatgataagatctttgtttggcggatagaaaggggaattacagat
ttagttttatacgataaaagcaaagtgtatgaaaagtacgggatttatccgtatcaattt
gcagattatctttctcttgttggagatcaaattgataatattccaggtgttaagggaata
ggaaaaaagactgccacatctttgttgaaaaaatatggttctttggacaatgttataaaa
aataaaaagttacttaccaataagctacaaaaattacttgaaaattcaaaggaaaattta
acattaagtagagaattggttgaactaatatacgacgtgcccttgaatttaaaagcagag
gatttgatatataaggggtataatcaaaaaaaacttttacaagttttgaaaaattttgaa
ttttcttcgatagttaaagaacttaatttgcaagaggaatttgaaaaggaatatattgta
gtggataatttaaaaaaacttgaaaaactacaagatgagataaagaaaatgaaagttttt
tccattgatacagaaacaacttcacttgaaccatatagtgcaaaacttgtagggatatct
gttgctacaaaggaaggtaaagcatactatatccccgtttcacatgtcaatggaaaaaat
tttgaaaaaaagtatgtattaaagtttttaaaggaaattttggaaagtggagagtttaat
atagtgggtcagaatttaaagtttgattataagatttttaaactttttggaattgatccc
catcccccatattttgatacaatggttgctgcgtatcttttaaatcctgatgaaagaaag
tacaatcttgaagagttatctttaaagtttttggggtataaaatgataagctttgacgaa
ttagtagatggtagtgttcccttatttgggaatgatttttcatttgttccaattgaaaaa
gctgcagagtattcttgcgaagatgcagatattacatttagattgtttcatatattgagt
aaacatatatcagaaataaaagatttgttctacaacatagaaatgccacttataaatgta
cttgctcaaatggaattaaatggagtgtattttgatttggattatttgaaaatattatcc
gaaaaatatgaacagaggatgagaagattagaagaaaaaatctatgagatttccggtgag
cgttttaatattaattcttctaagcaagttgcagaagtgttgtttaataaacttaaactt
ccatctattaaaaagacctcaacgggtagagattcaacaaatgcagaggttttagaagaa
cttgccaaggaatatgaaattgcgcaattgttactggaacatagaaaatatcaaaagctt
aagagtacctatattgattcaataccaaattctgttaatgatattacaaagagagtacat
agtagctttcatcaaacgggaactgcaacaggtagattgagcagttcagagcctaatctt
caaaatttacccacaaggactgaagaaggcagagaaattaggaaagctgttaagcctcaa
tttgaagactggtatatagtcggagcggattattcacaaattgaattgagaattttagcc
cacatgagtggggatgaaaaattacttgaagcatttaaaaataattatgatatccatacc
attaccgctgcaaatatctttaatatatctgaattaatggtaacagaagatatgagaaga
atgggaaaaatggtaaattttgcgataatatacggtatttcaccgtatggcttgtcaaag
agaataggattgaatgtaaatgagacaaaaaagataatagatagttattttaaatattac
aatggtgtttttgattttattaaacagacagtggaatttgcaaaaaagaatgggtttgta
aagactttgtttggaagaaaaagatatattccacagctaaggtcaaaaaatgttcgccaa
gaaggtgaaagaatagcgataaatacaccgattcaaggcacagcagcagatatcataaag
attgcaatgattaatatacataatgaacttttgaggagaaaattaaaaacaaagatgatt
ttgcaagttcacgacgaattagtctttgaagttccaaaggaggaattggaaatagtaaaa
gaaataatagtagacaaaatggagaattctgttaagttaaaagtcccattaaaagtagac
ttatacgaaggaaaagagtgggaatag
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