Thermosipho sp. 1063: BG95_01140
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Entry
BG95_01140 CDS
T04625
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
thp
Thermosipho sp. 1063
Pathway
thp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BG95_01140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thp03400
]
BG95_01140
DNA repair and recombination proteins [BR:
thp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BG95_01140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
AAA_28
AAA_21
Emr1
zf-C4H2
YlqD
Motif
Other DBs
NCBI-ProteinID:
APT71591
UniProt:
A0A1L7BDC7
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Position
complement(229477..231759)
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AA seq
760 aa
AA seq
DB search
MERFLDWEDVFKQFLEYTFSVYGREHLEKISKECVNGEEYEYLQEVFDIQVTQGLPVFQK
IEDIRPLLQKTKNYPILEPYEIFKIKEFMLLVHSLKEAISSTRYKVSFYISKLGNYDALI
NEIESVFEPDGNVKDKASKNLSVIRKEQKRLSLEIKEKIEKFISKNSRYLQEQLYTIRNG
RYVFIIKSGARGHLKGIVHGVSNTGVSLFFEPQEFIHLNDKIEILRSEEKIEINKILRGI
TSKIHDRYAHLINDIKIVGHIDSLFARAKYAYKNNGIVVKPEGTYLKLVNARHPLISRDK
VVPISIDIPKDKKGLIITGPNTGGKTVTLKTISLFIFMSQHGFPVLSDVGTRIPNFKLFV
DIGDSQNVVENLSTFSSHMVRIIEALKDADENSLVVIDELGSGTDPFEGSALAIAIIEHL
LEKNIKFIITTHLTNVKLFAMERDDIMTASMEFDINTLSPTYRLLLNTPGASHAFEISER
LGLNKDIIDRAKIYISEDHLKIENIIKHLNLKVSELEEKKKLLEKTLKEYERLKSEYEKK
YSILKLKKIEELDKELRNIYREFRTAKREIQSALFSTKTNSEELIKKKLKRLEQREKDIT
QVDKTLESLKYPNIAQEINKGDYVKLVDGTAVGRIIEKRQNGKILVDFNGLKIEVKKSRL
RKVEPPKKDEEPVLYQSVSVLSSNEIDLRGKTVEEAIELVDKFIDDLIYSDYSNGYIVHG
KGTGSLASNIWNFLREDKRIKSYRFGRPSEGGVGVTVVEV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggagcggtttttggattgggaagatgtttttaagcagtttttggaatatactttttct
gtgtatggtagagaacacttggaaaaaatttcaaaagaatgtgtgaatggtgaagagtat
gagtatcttcaagaagtgtttgatatacaggtaacccaagggttacctgtttttcaaaaa
attgaagatattagacctttgttgcaaaaaacaaaaaattatcccattcttgagccgtat
gaaatatttaagataaaggaatttatgttacttgtgcatagcttgaaagaagctataagt
agtacaaggtataaagttagtttctatatatcaaagttaggaaattatgatgcattgatt
aatgaaattgaatctgtgtttgaacctgatggaaatgttaaggataaggcatctaaaaac
ttgtccgttattagaaaagagcaaaaaaggttatctttagaaataaaagaaaagattgaa
aaatttatttcaaaaaatagtagatatttacaggagcagttgtatacgattaggaatgga
agatatgtgtttataattaaatcaggagcacgtggacatttgaaaggaattgttcatgga
gtttcaaatactggagtttcattgttttttgaacctcaggagttcatacatttaaatgat
aaaattgaaatattaagaagtgaagaaaagatagaaatcaataaaatattgagaggaata
actagtaaaattcacgatagatatgcacatttaattaacgatataaagatagttgggcat
attgattcacttttcgctcgtgcaaagtatgcgtataaaaataatgggattgtggtaaag
ccagaaggtacgtatttaaagttagtaaacgcaaggcatccattaatttcaagggataaa
gttgttccaatttctatagatattcctaaagataaaaaaggattgataattacaggtcca
aacactggtggtaaaactgttactttgaagactatttctctgtttatattcatgtcccaa
catggttttcccgttctttcagatgtaggtacaagaattccaaatttcaagttgtttgta
gatataggtgattctcaaaatgttgtggaaaatctcagcactttttcttctcatatggta
agaataatagaagccttgaaagatgccgatgaaaattctttggtggttatagatgaatta
ggttcgggaactgatccatttgaaggtagtgctcttgcaattgcaattatagagcatttg
cttgaaaaaaatattaaatttattattactactcaccttacgaatgtaaagttatttgcg
atggaacgtgatgatattatgactgcgtcaatggaatttgatataaatactttatctcca
acttacaggttacttttaaatactccaggtgcatcacatgcgtttgaaatttcagaaagg
ttgggattgaataaagatattattgatagagcaaagatatatatatctgaggatcattta
aaaattgaaaatataattaaacatttgaatttaaaagtgagtgaactagaagaaaagaag
aagcttcttgaaaagacgttaaaagaatatgagagattaaaatcggagtatgaaaaaaaa
tatagtattttgaagttaaagaaaatagaggaacttgataaagaattgaggaatatttat
agggaatttagaacggcaaaaagagagatccagtctgcattgttttctaccaaaacaaat
agcgaagaattaataaagaaaaaattaaaaaggcttgaacaaagggaaaaggatattacc
caggtggataaaactttggaaagtttaaagtatccaaatatagcccaggaaataaacaaa
ggggattacgttaaattggtagatggaacggctgttggtaggataattgaaaaaaggcaa
aacgggaaaattcttgtagattttaatggattaaaaatagaggtaaaaaagtcaagattg
agaaaggttgagccacctaaaaaagatgaagagcctgttttatatcaaagtgtttctgtg
ctttcttcaaatgaaattgatttaaggggaaagactgtggaagaagctattgaacttgtg
gataagtttattgatgatcttatatactctgattattcgaatggatatatagtgcatgga
aaaggtactggaagcttggcttcgaatatatggaattttttaagagaagacaagaggata
aaaagttatcgttttggaaggccaagtgaaggtggagttggagttaccgttgtggaggtg
tga
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