Thermosipho sp. 1063: BG95_03940
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Entry
BG95_03940 CDS
T04625
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
thp
Thermosipho sp. 1063
Brite
KEGG Orthology (KO) [BR:
thp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thp03032
]
BG95_03940 (gyrB)
03400 DNA repair and recombination proteins [BR:
thp03400
]
BG95_03940 (gyrB)
Enzymes [BR:
thp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BG95_03940 (gyrB)
DNA replication proteins [BR:
thp03032
]
Prokaryotic type
DNA Topoisomerases
BG95_03940 (gyrB)
DNA repair and recombination proteins [BR:
thp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BG95_03940 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
PAE
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
APT72069
LinkDB
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Position
complement(783959..785842)
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AA seq
627 aa
AA seq
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MDYNAQNIKVLKGLEPVRQRPGMYIGSTGKAGLHHLVYEIVDNSIDEALQGYCDTIYVTI
FEDGSVEIEDNGRGIPVDIHPETGKSALEVVMTTLHAGGKFSKDSYKVSGGLHGVGASVV
NALSEWLEVEVHREGKIYYQKYQRGVPLTEVKIIGNTEKRGTIVRFKPDSEIFSTVEFDS
DTILIRLRELAFLNPQVTIVFKDERENIEKTYHFTGGLKEFVNYLSKGAKSLHEPILVSG
EYNGIKVDVCFQYTASDFEKIYSFVNNIRTVDGGTHVTGFKTAFTRVVNELGKKTGQLKK
DTLRGEDVREGIVAIVSVLMSKTPEFEGQTKSKLGNEEVQEAVAKVVREKLLEYFDNSES
TLKIIIQKALEAKKAREAAKHAREMIKRKSVFGSSSLPGKLADCITKKMEESELFIVEGD
SAGGSAKQARDRNFQAILPLRGKILNVEKSGWLKLLKNEQIRDIITALGTGIGDDFDTSK
LRYGKIIIMTDADVDGAHIRTLLLTLFYRYMRKLIDEGKIYIAQPPLYRVNMGRKSYYFY
SDEELEDFKESIKDKKIEIQRYKGLGEMNPQQLWETTMDPENRKLLKVQIEDAEEADELF
EMLMGSDTESRKEFIFRHALQVKEIDI
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggattataatgcgcagaatataaaagtgttaaaaggtcttgaacctgtaaggcaaaga
cctggaatgtatataggttcaacaggaaaggcaggccttcatcatttggtatatgaaata
gtggataacagtatagatgaagccttacaaggatattgtgatacaatttatgtaactatc
tttgaagatggtagcgttgaaatagaagataacggtaggggaattcctgtagatatccac
cctgaaacgggtaaaagtgcgctagaagtggtaatgaccacattacatgcgggtggaaaa
ttttcgaaggattcctacaaggtaagtggtggattacacggtgttggtgcttccgttgta
aatgcattatcagagtggctggaagtagaagtgcatagagaaggtaaaatatactatcaa
aagtatcaaagaggggtaccactaactgaagtaaaaataattggtaataccgaaaaaaga
ggaacaattgtgaggttcaaaccagattcagaaattttttccactgtagaatttgattct
gatacgattttaataaggttaagggaacttgcgtttttaaatccacaagttacaatagtc
tttaaagatgaaagggaaaatatagaaaaaacataccactttacaggtggtttaaaagaa
tttgtaaattatttaagtaaaggtgcaaagagtttgcacgaacctattttggtttctggg
gaatacaatggtataaaggttgatgtatgttttcaatatactgcatcagattttgaaaag
atttattcatttgtaaataacataagaacggttgatggtggtacacatgttacgggtttt
aaaaccgcatttacacgtgttgtgaatgaattgggaaagaaaacgggtcagttgaaaaaa
gatactttaagaggggaagatgtgcgcgaaggtattgttgctattgttagtgtgttgatg
tctaaaactccagaatttgaaggacagactaaatcaaaacttggaaatgaagaggtacaa
gaagcagttgcaaaggttgttagggaaaaacttttggaatattttgataattcagaaagt
actttaaagataataattcaaaaggctttggaagcaaaaaaagctagagaagcggcaaag
catgcaagggaaatgataaaaagaaaaagtgtttttggaagttcttcattgcctggaaag
ttggcagattgtataacaaagaaaatggaagagtccgagttgtttatagttgagggtgat
tctgctggaggatccgcaaaacaggcaagggatagaaattttcaagctattttgccgtta
aggggaaaaattttgaacgttgagaaaagtggttggcttaagttattaaaaaatgaacag
attagggatataataacagcacttggaacgggaataggagatgattttgatacttcaaag
cttaggtatggaaagataattataatgaccgatgcagatgttgatggtgcacatataagg
actttacttttaacccttttttacaggtatatgagaaagttaattgatgagggtaaaatt
tacatagcacaaccacctctttatagagttaatatgggaagaaaatcgtactatttttac
agtgatgaagaattagaagattttaaagaaagtataaaagataaaaaaattgagatacaa
aggtacaaaggtcttggtgaaatgaacccgcagcaactttgggaaactacgatggatccg
gaaaatagaaagctattaaaagtgcagattgaagatgcagaggaagcagatgaacttttt
gaaatgcttatgggtagtgacactgagagtaggaaagaatttatctttagacatgcactt
caagtaaaggagatagatatttaa
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