Thermosipho sp. 1063: BG95_08145
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Entry
BG95_08145 CDS
T04625
Name
(GenBank) DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
thp
Thermosipho sp. 1063
Pathway
thp03030
DNA replication
thp03430
Mismatch repair
thp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BG95_08145
03430 Mismatch repair
BG95_08145
03440 Homologous recombination
BG95_08145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thp03032
]
BG95_08145
03400 DNA repair and recombination proteins [BR:
thp03400
]
BG95_08145
Enzymes [BR:
thp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BG95_08145
DNA replication proteins [BR:
thp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BG95_08145
DNA repair and recombination proteins [BR:
thp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BG95_08145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
CSTF2_hinge
Motif
Other DBs
NCBI-ProteinID:
APT72822
LinkDB
All DBs
Position
complement(1567800..1570274)
Genome browser
AA seq
824 aa
AA seq
DB search
MITAIVSPYSFKGSILKIEDTVRYASSQEAKVLVLCDNNFHATVKFIETCKKYHIKPIIA
YPYNDKVFYAKNTDELYSLFNAYSNNSFQKLDLNYIDKDQVYFAYYLPGKRKVYETFSKF
LGISPVEKGVLKKIYCNLDVSDYKITSFQTLPKAPSNFINLEKINNPAYKERLKYELEII
KAKNFLDYFYTVHKITNIAKKNNIKIGPGRGSAVGSLLSYMLGITKIDPLKYNLLFERFL
NIGRKEPPDIDLDVEDEKRKKLIELLKEEFKYVYHISTFSNIGLKTLKKIAFETNVSYLE
LNDLLGLPIHKSIHAAGIIISTSPLELPIKDNIIEWDMDSLQKIGYIKFDILGLKTLTIL
SELENVLGKPKLDSETFKFISKGYTNGIFQLESNIAKKIIRLIKPKSINELSIVISLNRP
GPLKSNLDKKLASAKWKNQKGKLDILDETYGILIFQEQIMKIAKNYAEFSDEEADILRKA
VSKKDKNIMKPLMEKFRNNLLKKFSENEVNELVEIILEFSEYAFNKSHAVAYSHISYYLS
YFKKHYPKEFYTILLKYDTSKIEKIIFEIQSRGFKISSPNIENRKDENTFYIPLFLIKGI
NENLERKILENSPYNSLEEFIQKNPNLNYSVIESLIKVGSFDYLSNNRRELLFKLKEIRN
GINEKILELSNKLFGKKISEEIKEEKAWERCDMEYNTLGFCISKPFTDNELENQLAPLSI
AFSRDQKLAINVKSIAGYASDGISTIKINIPDGIYTLIYDRELKIIPGYRKVTYSVNNLP
PKNFLEKGNTNEYLYVKNNNLKIKGARPLFDDYKIMIEGERDVY
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccgcaatagtttctccttattcttttaaaggatctattcttaaaattgaagac
actgtaagatatgcttcaagtcaagaggcaaaggttttggtattgtgtgataataacttt
catgcaactgtaaaatttatagaaacttgcaaaaaataccacattaaacctataattgca
tatccatacaatgacaaggtattttatgcgaaaaacacggatgagttgtattcgttattt
aatgcatattccaacaattcttttcaaaaattagatcttaattacatagataaagatcaa
gtttactttgcatattacttgcccggaaaaaggaaggtctatgaaacattttctaaattc
ttgggtatctcacccgttgaaaaaggtgtattaaaaaaaatttattgcaatttagatgtt
tcagattataaaattacatcttttcaaacacttccaaaagcaccatcaaattttataaac
ctggaaaaaatcaacaatcccgcatataaagaaaggttaaaatatgagttagaaatcata
aaagccaaaaatttcttagattacttctacacagtccacaaaataacaaatattgcaaaa
aaaaataacattaaaattggtcctggaaggggaagtgctgtaggctctttgctgtcgtac
atgctcggaataacaaaaattgaccctctaaaatacaatctgttatttgaaagatttcta
aacataggaagaaaagaaccaccggatatagatttagatgttgaagatgaaaaacggaaa
aaacttatagaactacttaaagaagaattcaaatatgtgtaccacataagtacattctct
aatatcggattaaaaacactaaaaaaaattgcattcgaaaccaatgtgtcttatttagaa
ctaaatgaccttttggggttacctattcacaaaagtattcacgctgcaggcataattata
tctacatcacccttagaacttccaataaaagataatataattgaatgggatatggactct
ttacaaaaaattggatatataaaatttgatattctaggcttaaaaactttgacaattctt
tctgaacttgaaaatgtacttggaaagccaaaattggatagtgaaacgttcaaattcata
tctaaaggctataccaacggaatttttcaacttgaaagtaatatcgcaaaaaaaattatt
agattgattaaaccaaaatccataaacgaactttcaatagttatttcccttaacaggcct
ggacctttaaaatctaatctagataaaaaattggcaagtgccaaatggaaaaatcaaaaa
ggcaaattagatatacttgatgaaacatatggaatattgatatttcaagaacaaataatg
aaaattgcaaaaaactacgcggaattttccgacgaagaagcagatattttgagaaaagca
gtttcaaaaaaagataaaaacataatgaaacctttaatggaaaaatttagaaataacctt
ctaaaaaaattctccgaaaatgaagtaaacgaattagttgaaattattttagaattttca
gaatatgcctttaacaaatctcacgccgttgcatattctcatatatcgtattatctttca
tatttcaaaaaacactatccaaaagaattttatacaatacttttaaaatacgatacttca
aaaatagaaaagataatttttgaaattcaatcaaggggattcaaaatttcttcccctaat
atcgaaaatagaaaagatgaaaatactttttatatccccctatttttaataaaaggtata
aacgaaaatcttgaaagaaaaatacttgaaaactctccatacaattccttagaagagttt
attcaaaaaaatccaaatttaaattactcggtaattgaatccttaatcaaagttggaagt
tttgattatctttcaaataatagaagggaacttttatttaaattaaaagaaattaggaat
ggaataaatgaaaaaattttggaattatctaataaactatttggtaaaaagattagtgaa
gaaataaaagaagaaaaagcatgggaacgctgcgatatggaatacaatactttgggattt
tgtatttcaaaaccatttacagataacgaattagaaaaccaacttgccccgctttcaata
gctttttcaagggatcaaaaattagcaattaatgttaaatcaatcgccggatatgcaagt
gatggtatttctacaattaaaataaatattcccgatggaatttacacgttgatatatgat
agagaattaaaaataattccaggttatagaaaagtaacttacagtgtaaacaatctccca
ccaaaaaactttttagaaaaaggaaacaccaatgaatacctctacgttaaaaataataat
ctaaaaataaaaggtgcaagacctctctttgacgattataaaataatgatagaaggtgaa
agagatgtatattaa
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