Thermotoga sp. 2812B: T2812B_01345
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Entry
T2812B_01345 CDS
T03494
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
thq
Thermotoga sp. 2812B
Pathway
thq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T2812B_01345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thq03019
]
T2812B_01345
Messenger RNA biogenesis [BR:
thq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
T2812B_01345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
RMMBL
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
AIY85820
LinkDB
All DBs
Position
256619..258187
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AA seq
522 aa
AA seq
DB search
MRIEILDGHRNIGGNKIRVVDSENDGFLLDFGLNFSRWGEFFEEFLNPRTGKILHDLLKL
KMVPRLNIYRDDLFDGKFEDPVNHAFLFLSHAHADHTGMVGLIDEKIPLLMTGETFAVMR
ASVYTSNSNVLTQLGGKKRRRVSDKDLENGIREDLTVSPGNSKNAERLTRRISFPKNIEF
NDDLTVVDMNSLWKNELFVEPVYHSVIGAAGLAARVDDLWLAYTGDFRTGPETAEEERYW
LDTLGEKRLALSLRTSRFFENLKDKRPLVLIVEGTRVTREENVENTEKDVFENAMRVFRG
TKNLILVDFPIRHLERLFTFLKVCMENDRRLVLMPKDYAYLLEMERVEPLWKLTDEERSF
VRVYHPGKVTYINLEKDALLRAREEGILLSPEEINLHPEKYTMVAGYWDFPHILDLDERV
LNGAVYIHSTSEAYTEEQEIDAKRFMNWLRYFNIIPFGIREMNGNIVFTKEFHASGHVSP
QGLEKILNELNPDYIVPVHTLNPGWFVERCDEKVLLENVIVL
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgagaatagagatactcgacgggcacagaaacatagggggaaacaaaatcagagtggtt
gattctgagaacgacggttttcttctggacttcgggttgaacttttccagatggggagag
ttcttcgaggagtttttgaaccccaggacaggtaagatccttcatgacctgctgaagctc
aaaatggttccccggctcaatatttacagggacgacctcttcgatggaaagttcgaagat
cctgtgaaccacgcctttctctttttgagccacgcgcacgcggatcacaccggaatggtg
ggcctcatagacgaaaagatccccctcctcatgaccggtgaaacctttgcggtgatgaga
gccagtgtgtacacgagcaactcgaacgttctgactcagctcggcggaaagaaaagaaga
agggtctcagataaagatctggaaaacggaatccgcgaagacctcacggtgagtccggga
aattcgaaaaacgcggaaagattgacaagacgcatttcttttcccaagaatatagagttc
aacgatgacttaacagtcgtcgatatgaactccctgtggaagaacgagctgttcgttgaa
cctgtgtaccactccgtcataggagccgctggccttgcggcaagggtggacgacctctgg
ctagcctacaccggagacttcagaacgggtcccgaaacggcagaagaagagcgctactgg
ctggacacactcggtgaaaagaggctcgcactttccctcaggacctcgagattttttgag
aatctgaaggacaagcgcccgctcgttctcatcgttgagggaaccagagtcacgagggaa
gagaacgtggagaacacggaaaaggacgtcttcgaaaacgcgatgagagttttcaggggg
acaaagaatctgatactcgtggattttcccatcagacacctggagaggcttttcactttc
cttaaggtctgcatggaaaacgacagaagactcgttctcatgccaaaagactacgcctat
cttctcgagatggaacgagtggaaccactctggaagctgacggatgaggaaaggtccttc
gttcgtgtctaccaccccgggaaggtcacctacataaacctcgaaaaagacgcactgctt
cgagccagagaggaagggatccttctctcaccagaggagataaacctgcatccagagaaa
tacaccatggtcgcgggatactgggacttcccgcacatcctcgatctcgacgaaagagtt
ctgaacggcgccgtctatatccattcgacgagcgaagcctatacggaagagcaggagatc
gatgcgaagcgcttcatgaactggctcaggtacttcaacataattcctttcggcataaga
gaaatgaacggaaacatcgtcttcacaaaagagttccacgcctcgggccacgtctctcct
cagggtctggagaagattttgaacgaactgaatccggactacatagttcccgttcacacc
ctgaatccgggctggttcgtcgagcgctgtgatgaaaaggtcttactcgagaatgtgatt
gtgttataa
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