Thermotoga sp. 2812B: T2812B_02910
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Entry
T2812B_02910 CDS
T03494
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
thq
Thermotoga sp. 2812B
Pathway
thq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T2812B_02910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thq03400
]
T2812B_02910
Enzymes [BR:
thq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
T2812B_02910
DNA repair and recombination proteins [BR:
thq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
T2812B_02910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
UvdE
Motif
Other DBs
NCBI-ProteinID:
AIY86129
UniProt:
A0AAN0SJ57
LinkDB
All DBs
Position
complement(587865..588728)
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AA seq
287 aa
AA seq
DB search
MIKIGAHMPISKGFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHG
IDWENAFCHSGYLINLASPKDDIWQKSVELLKKEVEICRKLGIRYLNIHPGSHLGTGEEE
GIDRIVRGLNEVLNNTEGVVILLENVSQKGGNIGYKLEQLKKIRDLVDQKDRVAITYDTC
HGFDSGYDITKKEGVEALLNEIESLFGLERLKMIHLNDSKYPLGAAKDRHERIGSGFIGE
EGFAVFFSFKEIQEVPWILETPGGNEEHAEDIKKVFEIIEKFGIEVD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaataggagctcacatgcccatctcgaaaggatttgacagggtaccacaagac
acagtgaacataggggggaactccttccagatatttcctcacaacgctcgctcctggagt
gcaaaactcccttctgacgaggccgccacgaaattcaaaagggagatgaaaaaacacggt
atcgactgggaaaacgcgttttgtcacagtggatacctcataaatctcgccagtccaaag
gatgacatttggcagaaatctgttgaacttttgaaaaaagaagtggaaatttgcagaaag
ctgggtataaggtatctgaacattcaccccggaagccacctcggaactggagaggaagag
ggaatagacagaatagtaagaggtctgaacgaagtgctgaacaacaccgaaggtgtggtg
attcttcttgaaaacgtttcacaaaaaggaggaaatatcggatacaaattggaacagctg
aaaaaaatcagagatctcgtcgatcaaaaagaccgtgtggccatcacctacgatacgtgt
cacgggttcgactctggatacgacatcacaaaaaaggagggtgtcgaagcccttctcaac
gagatagagagcctgttcggtctggaaagactcaagatgatacacctgaacgattctaaa
taccccctcggtgcggcaaaagacaggcacgaaagaataggaagcggattcataggtgaa
gaaggttttgccgtatttttctccttcaaagagatccaggaagttccatggatcctggaa
acccctggtggaaacgaagagcacgcggaggatataaagaaagtgtttgagatcatagaa
aaattcggtatagaggtcgattga
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