KEGG   Thermotoga sp. 2812B: T2812B_04875
Entry
T2812B_04875      CDS       T03494                                 
Name
(GenBank) phosphodiesterase
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
thq  Thermotoga sp. 2812B
Pathway
thq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:thq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    T2812B_04875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thq03019]
    T2812B_04875
Messenger RNA biogenesis [BR:thq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     T2812B_04875
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B Lectin_N TMP_3 Cas3_HD Spore_YhcN_YlaJ
Other DBs
NCBI-ProteinID: AIY86518
UniProt: A0AAN0W1D3
LinkDB
Position
1001195..1002721
AA seq 508 aa
MMLWYIVAGAGGLLIGYLIANYQINQKLRKAKEDAQTIIEKAEKEANEIKKKAIIEGREE
VHRLREEFEKERSRREEELRALEERLLKREELLTRKEENLEKREQQVEELKANLEEKMRE
VEEKEKRIDEELKRLAGMTVEEARELILDEARQRYEHDLAKLYKEMKEQVEEEAEKEAKK
VIAFAVQRYAPDYVGEITVSTVSLPSDDMKGRIIGREGRNIRTFEKITGVDLIIDDTPEV
VVLSCFNPLRREIARITLEKLVADGRIHPARIEEMYEKAKQEVEKAIKEAGQEATFKAGV
MGLHPELVKLLGKLKYRTSYGQNVLNHSIEVALLAGYMASELGLNADKARRGGLLHDIGK
AVDQELEGSHTTIGAELARRYGEKEDIINMILSHHGEEEPMTPEAVLVAAADALSAARPG
ARRESLENYIKRLMKLEEIAKSFKYVEKAYAIQAGREIRVIVEPDKVDDALAEKLAYDIS
KKIEEELEYPGVLKVVVIREKRSVAYAK
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgatgctgtggtacatagtagcaggagccggtggtcttctgattggatatttaatagca
aactatcagataaatcaaaagctcagaaaagcgaaagaagacgctcaaaccatcatcgag
aaagcagaaaaagaagcaaacgagataaaaaagaaagcgataatagaaggaagagaggaa
gttcacaggctcagagaggaatttgaaaaagagcgatccagaagagaagaggaattgaga
gcattagaagaaagactcttgaaaagagaagagctcctgacaagaaaagaagagaacctt
gagaaaagggaacagcaggttgaagaactcaaagcaaatctggaagaaaaaatgagagag
gtcgaagaaaaggaaaaaagaatcgacgaagaattgaaacgccttgccggtatgactgta
gaagaggcaagagaactcatcctcgatgaagccaggcagaggtacgaacacgaccttgcg
aaactctacaaagagatgaaagaacaggttgaagaagaagctgagaaggaagccaagaaa
gtcatagcattcgctgttcagagatacgcaccagattatgtaggagaaatcaccgtttct
accgtttctctaccgtcggatgacatgaagggaagaatcataggtagagaaggaagaaac
atcaggacatttgaaaagatcacgggtgtagacttgataatagacgacaccccggaagtg
gtggttctttcctgctttaaccctctgagaagagagatagcccgtatcacactggaaaaa
ctggtggcggatggaagaatacatcctgcaaggatcgaagaaatgtacgaaaaagcaaag
caggaagtggagaaagccataaaagaagctggacaggaggcgacgttcaaagcgggtgtt
atggggctccatccggagcttgtgaaactccttggaaaattgaaatacagaacgagctat
ggccaaaacgttctgaaccattcgatagaagtggctctgctcgccggttacatggcttct
gaacttgggctaaacgcggacaaagcgagaagaggaggactcctccacgatataggaaaa
gctgttgatcaggagctggaaggttcacacacgaccataggtgcagagcttgcccgaaga
tacggagaaaaagaagacatcataaacatgattctcagccatcacggagaagaagaaccc
atgacacctgaagcagtactcgtggcagctgctgatgctctctccgcggcaagaccaggt
gcgagaagagagagtctggaaaactacatcaagcgtcttatgaagctggaggaaatagca
aaaagtttcaaatacgttgaaaaagcctacgccattcaggctggaagagaaatcagggta
atcgtggaacccgacaaagtggatgacgctctcgctgaaaaactcgcctacgatatttct
aaaaagatagaagaagagctcgaatatcccggtgttctgaaagttgtggtgataagagag
aaaagaagtgtcgcttacgcgaagtaa

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