Thermotoga sp. 2812B: T2812B_06435
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Entry
T2812B_06435 CDS
T03494
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
thq
Thermotoga sp. 2812B
Pathway
thq03030
DNA replication
thq03410
Base excision repair
thq03420
Nucleotide excision repair
thq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T2812B_06435
03410 Base excision repair
T2812B_06435
03420 Nucleotide excision repair
T2812B_06435
03440 Homologous recombination
T2812B_06435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thq03032
]
T2812B_06435
03400 DNA repair and recombination proteins [BR:
thq03400
]
T2812B_06435
Enzymes [BR:
thq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T2812B_06435
DNA replication proteins [BR:
thq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
T2812B_06435
DNA repair and recombination proteins [BR:
thq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
T2812B_06435
NER (nucleotide excision repair)
GGR (global genome repair) factors
T2812B_06435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Ribosomal_L12
Motif
Other DBs
NCBI-ProteinID:
AIY86820
UniProt:
A0AAN0W1U1
LinkDB
All DBs
Position
complement(1294285..1296966)
Genome browser
AA seq
893 aa
AA seq
DB search
MARLFLFDGTALAYRAYYALDRSLSTSTGIPTNATYGVARMLVRFIKDHIIVGKDYVAVA
FDKKAATFRHKLLETYKAQRPKTPDLLIQQLPYIKKLVEALGMKVLEVEGYEADDIIATL
AVKGLPLFDEIFIVTGDKDMLQLVNEKIKVWRIVKGISDLELYDAQKVKEKYGVEPQQIP
DLLALTGDEIDNIPGVTGIGEKTAVQLLEKYKDLEDILNHVRELPQKVRKALLRDRENAI
LSKKLAILETNVPIEINWEELRYQGYDREKLLPLLKELEFASIMKELQLYEESEPVGYRI
VKDLVEFEKLIEKLRESPSFAIDLETSSLDPFDCDIVGISVSFKPKEAYYIPLHHRNAQN
LDEKEVLKKLKEILEDPGAKIVGQNLKFDYKVLMVKGVEPVPPHFDTMIAAYLLEPNEKK
FNLDDLALKFLGYKMTSYQELMSFSSPLFGFSFADVPVEKAANYSCEDADITYRLYKILS
LKLHEADLENVFYKIEMPLVSVLARMELNGVYVDTEFLKKLSEEYGKKLEELAEEIYRIA
GEPFNINSPKQVSRILFEKLGIKPRGKTTKTGDYSTRIEVLEELAGEHEIIPLILEYRKI
QKLKSTYIDALPKMVNPKTGRIHASFNQTGTATGRLSSSDPNLQNLPTKSEEGKEIRKAI
VPQDPNWWIVSADYSQIELRILTHLSGDENLLRAFEEGIDVHTLTASRIFNVKPEEVTEE
MRRAGKMVNFSIIYGVTPYGLSVRLGVPVKEAEKMIVNYFVLYPKVRDYIQRVVSEAKEK
GYVRTLFGRKRDIPQLMARDRNTQAEGERIAINTPIQGTAADIIKLAMIEIDRELKERKM
RSKMIIQVHDELVFEVPNEEKDALVELVKDRMTNVVKLSVPLEVDVTIGKTWS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcgagactatttctctttgatggaactgctctggcctacagagcgtactatgcgctc
gatagatcgctttctacttccaccggcattcccacaaacgccacatacggtgtggcgagg
atgctggtgagattcatcaaagaccatatcattgtcggaaaagactacgttgctgtggct
ttcgacaaaaaagctgccaccttcagacacaagctcctcgagacttacaaggctcaaaga
ccaaagactccggatctcctgattcagcagcttccgtacataaagaagctggtcgaagcc
cttggaatgaaagtgctggaggtagaaggatacgaagcggacgatataattgccactctg
gctgtgaaggggcttccgctttttgatgaaatattcatagtgaccggagataaagacatg
cttcagcttgtgaacgaaaagatcaaggtgtggcgaatcgtaaaagggatatccgatctg
gaactttacgatgcgcagaaggtgaaggaaaaatacggtgttgaaccccagcagatcccg
gatcttctggctctaaccggagatgaaatagacaacatccccggtgtaactgggataggt
gaaaagactgctgttcagcttctagagaagtacaaagacctcgaagacatactgaatcat
gttcgcgaacttcctcaaaaggtgagaaaagccctgcttcgagacagagaaaacgccatt
ctcagcaaaaagctggcgattctggaaacaaacgttcccattgaaataaactgggaagaa
ctccgctaccagggttacgacagagaaaaactcttaccacttttgaaagaactggaattc
gcatccatcatgaaggaacttcaactgtacgaggaatccgaacccgttggatacagaata
gtgaaagacctggtggaatttgaaaaactcatagagaaactgagagaatccccttcgttc
gccatagatcttgagacgtcttccctcgatcctttcgactgcgacattgtcggtatctct
gtgtctttcaaaccaaaggaagcgtactacataccactccatcatagaaacgcccagaac
ctggatgaaaaagaagttctgaaaaagctaaaagaaatcctggaggaccccggagcaaag
atcgttggtcagaatttgaaattcgattacaaggtgttgatggtaaagggtgttgaacct
gtccctcctcacttcgacacgatgatagcggcttaccttcttgagccgaacgaaaagaag
ttcaatctggacgatctcgcattgaaatttcttggatacaaaatgacctcttaccaggaa
ctcatgtccttctcttctccgctgtttggtttcagttttgccgatgttcctgtagaaaaa
gcagcgaactattcctgtgaagatgcagacatcacctacagactctacaagatcctgagc
ttaaaactccacgaggcagatctggagaacgtgttctacaagatagaaatgcctcttgtg
agcgtgcttgcacggatggaactgaacggtgtgtacgtggacacagagttcctgaagaaa
ctctcagaagagtacggaaaaaaactcgaagaactggcagaggaaatatacaggatagct
ggagagccgttcaacataaactcaccgaagcaggtttcaaggatcctttttgaaaaactc
ggcataaaaccacgtggtaaaacgacgaaaacgggagactactcaacacgcatagaagtc
ctcgaggaacttgccggtgaacacgaaatcattcctctgattctcgaatacagaaagata
cagaaattgaaatcaacctacatagacgccctccccaagatggtcaacccaaagaccgga
agaattcatgcttctttcaatcaaacggggactgccactggaagactcagcagcagcgat
ccaaatcttcagaacctcccgacgaaaagcgaagagggaaaagaaatcaggaaagcgata
gttcctcaggatccaaactggtggatcgtcagcgccgactactcccagatagaactgagg
attcttacccatctcagtggtgatgagaatcttttgagggcattcgaagagggcatcgac
gtccacactctaacagcttccagaatattcaacgtgaaacccgaagaagtaaccgaagaa
atgcgccgcgctggtaaaatggttaatttttccatcatatacggtgtaacaccttacggt
ctgtctgtgaggcttggagtacctgtgaaagaagcagaaaagatgatcgtcaactacttc
gtcctctacccaaaggtgcgcgattacattcagagggtcgtatcggaagcgaaagaaaaa
ggctatgttagaacgctgtttggaagaaaaagagacataccacagctcatggcccgggac
aggaacacacaggctgaaggagaacgaattgccataaacactcccatacagggtacagca
gcggatataataaagctggctatgatagaaatagacagggaactgaaagaaagaaaaatg
agatcgaagatgatcatacaggtccacgacgaactggtttttgaagtgcccaatgaggaa
aaggacgcgctcgtcgagctggtgaaagacagaatgacgaatgtggtaaagctttcagtg
ccgctcgaagtggatgtaaccatcggcaaaacatggtcgtga
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