Thermotoga sp. RQ7: TRQ7_02540
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Entry
TRQ7_02540 CDS
T03669
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
thr
Thermotoga sp. RQ7
Pathway
thr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
thr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TRQ7_02540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thr03021
]
TRQ7_02540
03400 DNA repair and recombination proteins [BR:
thr03400
]
TRQ7_02540
Enzymes [BR:
thr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TRQ7_02540
Transcription machinery [BR:
thr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TRQ7_02540
DNA repair and recombination proteins [BR:
thr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TRQ7_02540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RnfC_N
Apocytochr_F_C
RPOC_hybrid
Biotin_lipoyl_2
Spermine_synth
Motif
Other DBs
NCBI-ProteinID:
AJG40348
UniProt:
A0A0B5KJ14
LinkDB
All DBs
Position
complement(478999..484071)
Genome browser
AA seq
1690 aa
AA seq
DB search
MPMSSFKRKIKAIQIKIASPDVIRSWSGGEVKKPETINYRTFKPERDGLFCERIFGPVKD
YECACGKYKGKKYEGTVCERCGVRVESREARRKRMGHIELAAPAVHIWYLESIPSVLGTL
LNMNVSDLENIIYYGSRRVIERAFIVTDPKDTPFAQGDIIYETEYRIYRKKWDFEVEQAF
IVKNPRSPVLSDIDGEVILRTEKTVTGREITWIIVRNVNRAEHTVLPGMIITVKDGQEVE
KGQDLTREMNVDPLYAPFDGHVEIDEISNTITVKPLTTSKDQPVVFTVPYGARVLVSNGQ
KVKKGDQLTTSTTLPAVKASISGRVKFGSNLNVRALEDGNFEVLSSGNVYIEQVIEERKY
PVFEGALVYVNNGDQVKKGDHLADRFLFEEEYLSSTEYKIFESHYPTMFDVEERTENDRP
IVVITDIDPEVSKETGLKMGDIITENEYEAYLQIYPEKIVADAGAQAIKKLLQNLDLEEL
RAELEAELKKLPASSSKAMKLRRRLKMVKDFIKSGNKPEWMVLEVVPVIPPDLRPMIQIE
GGRFATTDLNELYRRLINRNNRLRKLLELGAPEIILRNEKRMLQEAVDALIHNGSDSEGK
RSRRAVLKDRNGRPLKSLTDLLKGKKGRFRRNLLGKRVDYSGRAVIVVGPHLKIHQCGIP
KKMAMELFKPFVLAKLLGEGSTSKTMRKVKKAIIEKEMPEAWEVLEEVIKGSVVLLNRAP
TLHRMSIQAFEPKLVEGNAIQLHPVVCPPFNADFDGDQMAVHVPLSAAAQAEARFLMLSR
YNIISPAHGKPISLPTQDIIIGSYYLTTVGKDFDSLKEEDIRWRFSSPEEAMLAYHLGYI
KLHTPILIKVSIKGEEKRIKTTLGRVIFNSILPEDLRDYNRIFDKKQINALVYETFKRYG
IDRAADLLDDVKDLGFHYATVSGLTLSLKDLKIPPERDEILKRTWEKVRIIEENYERGFL
TEEQRKSEIIRLWMNVTEEITELTSKTLAEDPFNPIYMMVNSGARGNIDQVKQLAGIRGL
MIKAYDPRSREIKSKIFKGQAIHEALTFDYPVDKNLREGVDILQFFISTYGARKGQVDTA
MNTSFAGYLTRRLVDVAQSVTVTEPDCGTHEGIRAMDLIKDGTVVEKMNEFLFGRVLASD
VLDPETKEVLKNPETGKEYTRNTMLTDDDANFLASYKKMVDVVKYDEIDITELSLPNMYA
EIAELVGEYKEGTELTWDVVKAARNEGKYRIKVKMYPVVGTVYANEQPLYDKKGERELLV
YQEVINEVVAKLLEENGVEKVLVRPDIIVRSPLTCESEYGVCAACYGMDLSNHKIVNVGE
AVGIVAAQSIGEPGTQLTMRTFHVGGVMGASDIVSGLTTVEKTFEPYAFLREEKSGGKKE
IRKYYGSEAVLCEVDGFVKDIATDETGRTVIYIEDYAGGIHAYRIPKRAKVKVKKGQKVL
RGDTLTTGAIVWWKLLELESEKGVLTAMNLLKIIKNAYVQQGVSIHDKHFEIIFRQMLSM
ALVIDPGDSDYLPDQLVPLVDIKRTNREILEGNARVEENRKWVIGKMLAKRVITETDDGE
LVELAQKGEEVTEELLKKFIEAGIKEIDVVEKDRVVTYQILPKEPIKYKRRLLSLKKAAL
NYPGWLSAAAFEETAWVLTAAAIEGKVDPLIGLKENVIVGQLIPAGTGLDVFAGIQVEET
PRAAAEEKLA
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgtcttctttcaagaggaaaataaaggcaatacagataaagatagcctccccg
gatgtgataagaagctggtccggtggagaggtgaagaagccggaaactataaactacaga
acgttcaagcccgagcgcgatggactcttctgcgagagaatcttcggccctgtgaaggat
tacgagtgtgcttgtggaaagtacaagggaaagaagtacgaaggaaccgtctgtgaaagg
tgtggtgtcagagttgaatccagagaggccagaagaaagagaatgggtcacatagaactg
gcagcccccgcagtgcatatctggtatctggagagcatcccaagtgtccttggaactctc
ctgaacatgaacgtctctgacctcgagaacatcatctactatggaagccgccgtgtgata
gagagggcgttcatcgtcaccgatccgaaggatacaccctttgcacagggtgatatcatc
tatgaaaccgaatacaggatctacagaaagaagtgggactttgaagtcgagcaggcgttc
attgtgaaaaatcccagatctcctgttctttcagacatagacggcgaggtaattctgaga
acagaaaaaaccgtcaccggaagggaaatcacatggatcatagtgagaaatgtgaacaga
gcagaacacacggtccttccaggcatgataatcacggtgaaagatggacaggaagtggaa
aagggacaggatctgaccagagagatgaacgtcgatcccctgtatgctccattcgatgga
cacgtggaaatcgatgagatttcgaacacaatcacggtaaaacccctcacaacgagtaag
gatcaacccgttgtgttcaccgtaccgtacggagcaagggtgctcgtctcaaacggtcag
aaggtgaaaaagggtgatcagctcacaacttccaccaccctcccggcggtcaaggcgagt
atatctggaagagtgaagttcggttccaacctcaacgtgagggcactggaagatggaaat
tttgaagttctctcgtctggcaacgtgtacatcgaacaggtgatagaagaaaggaagtac
cccgttttcgaaggagcccttgtttacgtgaacaacggtgaccaggtgaagaaaggagat
cacctggccgacaggttccttttcgaggaagaatacctctcctccacagaatacaagata
tttgaatcgcactatccaaccatgtttgatgtagaagagagaacggaaaacgacaggcca
attgtggtcataacggatatagatcccgaggtctcgaaagagacgggtctgaagatggga
gatatcatcaccgagaacgaatacgaagcgtaccttcagatctatccagagaaaatagtg
gcggatgccggtgcccaggcgataaagaaactgcttcagaacctggatctggaagagttg
agagcagaacttgaggctgaactcaagaaattgcccgcttccagttcgaaggcgatgaaa
ctgagaagaagactgaagatggtaaaggacttcatcaaatcgggcaacaaacccgaatgg
atggtgcttgaggttgtacctgtgattcctccagacctcaggcccatgatccagatcgaa
ggaggaaggttcgccacaactgacctcaacgaactttacagaaggctgatcaacagaaac
aacaggctcaggaagttgctggaactcggtgcacctgagatcattctgaggaacgaaaag
agaatgcttcaggaggcagtcgatgccctcatacacaacggatccgattctgagggtaaa
agaagcagaagagcggttctgaaagacagaaatggaagaccactgaaatctctcaccgat
cttctgaaaggaaagaaaggaaggttcagaaggaatcttcttggaaaaagggtggattat
tctggaagggcggtcatcgttgttggtccacacctgaagatccatcagtgtggtatacca
aagaagatggcgatggagctcttcaagccgtttgttctggcaaagcttctgggagaagga
agcaccagcaaaacgatgaggaaggtcaaaaaggcgattatagagaaagaaatgcccgag
gcatgggaagttctcgaagaggtgataaagggcagcgtggttcttctcaacagggctccc
acgcttcacagaatgtccatacaggcgttcgaaccaaaactggtggaaggaaacgccata
cagcttcatccggtggtctgtccaccgttcaacgcggacttcgacggcgaccagatggcc
gttcatgtaccactttcagccgctgcacaggctgaggcaaggttcctcatgctctcaagg
tacaacataatctcaccggcacacggaaaaccaatttctctcccgacacaggatatcatc
atcgggtcttactacctcacgacggtcggaaaagacttcgactctttgaaggaagaagat
atcaggtggagattttcctcacctgaagaggcaatgctggcgtatcacctcggatacata
aaactccacacaccgattctcataaaggtcagcataaaaggagaagaaaagagaataaag
acaactcttggaagggttatcttcaacagtattctcccagaagatttgagagactacaac
agaatattcgacaagaaacagataaacgccctcgtttatgaaaccttcaagagatacggt
atagacagggcggcggatcttctcgacgatgtaaaggaccttggcttccactatgcgacc
gtctctggcctcacgctttcactcaaggatttgaagataccaccagaacgtgacgagatc
ctgaaaaggacctgggaaaaagtaagaatcatcgaggaaaactacgaaagaggtttcctg
acggaagaacagagaaagagcgagatcataaggctctggatgaacgtcacagaagaaatc
acagaactcacttcgaagaccctcgcggaagatccgttcaaccccatctacatgatggtg
aactccggtgcgagaggtaacatcgatcaggtgaagcagcttgcaggtatcagaggattg
atgatcaaggcgtacgacccaaggtcgagggagataaaatcgaaaatcttcaaaggtcag
gcgatacacgaagcactcaccttcgattacccggttgacaagaacctcagggaaggagtt
gacatcctccagttcttcatatccacctacggtgcaagaaagggtcaggtcgacactgca
atgaacacctcctttgccgggtacctgacaaggcgactggtggacgtggcacagagcgtc
acagtgacagaacccgattgtggcacacacgaaggaatcagagccatggatctgataaag
gatggtacggttgtagagaagatgaacgaattcctcttcggaagagtgcttgcaagcgat
gtactcgatccagagacgaaggaagttctgaagaaccccgaaacgggaaaagaatacacg
agaaacacgatgctcacagacgacgatgccaacttccttgcctcttacaagaagatggtt
gacgttgtgaaatatgatgaaatagacataaccgaactttcacttccgaacatgtacgcg
gagatcgcagaacttgttggagagtacaaagagggaaccgagctcacctgggatgtggtg
aaagccgccaggaacgaaggaaagtacagaataaaggtgaagatgtatccggttgttgga
acggtctacgccaacgaacagcccctttacgacaagaaaggagaaagagaacttctcgtc
taccaggaagtcataaacgaagtagtggcaaaacttctcgaagaaaacggtgttgagaag
gttctggtgaggcccgatatcattgtgagatctcctctcacgtgtgaatccgagtacgga
gtgtgtgccgcatgttacggaatggatctttccaatcacaagatagtgaacgtcggtgag
gcggtgggaatcgttgcggcacagtccataggagagccgggaacacagctcaccatgaga
acgttccacgtcggaggagtcatgggtgccagcgacatagtgagtggtctcacgacggtg
gaaaagacctttgagccttacgccttcctgagagaagaaaaaagcggtggcaagaaggag
atcagaaagtactatggatccgaggctgttctgtgtgaagtggacggattcgtaaaggac
atcgcaaccgacgaaacaggaagaacagttatctacatagaagactacgctggtggaatc
cacgcttacaggatacccaagagagcgaaggtgaaggtcaaaaaaggtcagaaggttctg
aggggcgacacgttgacaaccggtgccatcgtgtggtggaaactgctcgaactcgagtcg
gaaaagggtgtccttacggccatgaacctcttgaagatcataaagaacgcctacgtgcag
cagggtgtcagcatacacgataaacacttcgagatcatcttcaggcagatgctcagtatg
gccctcgttatcgatccaggtgacagcgattatctaccggatcagctggtaccacttgta
gacataaagagaacgaacagagagatactggaaggtaacgccagagttgaagagaacaga
aagtgggtcatcggaaaaatgctcgcaaaaagagttatcaccgaaacggacgatggtgaa
ctcgtggaacttgcacagaaaggtgaagaggtaacagaagaacttctgaagaagttcata
gaggcgggtataaaggaaatcgacgtcgtcgaaaaagacagagtggtaacgtaccagatc
cttccaaaagagccaataaaatacaagagaagactcctttcactcaagaaggctgccctg
aactatccgggatggctcagtgcggcagcgttcgaagaaaccgcctgggttctgactgca
gcggcaatagaaggaaaggtggatcctctcatcggtttgaaagagaacgtgatcgtcgga
caactcatacccgctggaacaggtctggacgtgtttgcgggtattcaggtggaggaaaca
ccaagagcggcagcggaagagaaactcgcatga
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integrated database retrieval system
