Thermotoga sp. RQ7: TRQ7_05385
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Entry
TRQ7_05385 CDS
T03669
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
thr
Thermotoga sp. RQ7
Pathway
thr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRQ7_05385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thr03019
]
TRQ7_05385
Messenger RNA biogenesis [BR:
thr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TRQ7_05385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
Cas3_HD
KH_KhpA-B
TMP_3
PX
Spore_YhcN_YlaJ
Motif
Other DBs
NCBI-ProteinID:
AJG40887
UniProt:
A0A0B5L2M5
LinkDB
All DBs
Position
complement(1069394..1070920)
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AA seq
508 aa
AA seq
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MMLWYVLAGVGGLLVGYLIANYQINQKLKKAEKDAKSILEKAEKEANEIKKKAIVEGREE
VHRLREEFERERARKEEELRSLEERLLKREELLTRKEENLEKREIQIEEMKAKLEEKMKE
VEEKEKRIDEELNKLAGMTVEEARELILEEARQRYEHDLAKLYKEMKEQVEEEAEKEAKK
VIAFAVQRYAPDYVGEITVSTVSLPSDDMKGRIIGREGRNIRTFEKITGVDLIIDDTPEV
VVLSCFNPLRREIARITLEKLVADGRIHPARIEEMYEKAKQEVEKAIKEAGQEATFKAGV
MGLHPELVKLLGKLKYRTSYGQNVLNHSIEVALLAGYMASELGLNADKARRGGLLHDIGK
AVDQELEGSHTTIGAELARRYGEKEDIINMILSHHGEEDPRTPEAVLVAAADALSAARPG
ARRESLENYIKRLMKLEEIAKSFKYVEKAYAIQAGREIRVIVEPDKVDDALAEKLAYDIS
KKIEEELEYPGVLKVVVIREKRSVAYAK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgtggtatgtactcgcaggtgtcggaggacttctggtgggatacctaatcgca
aattatcagataaatcaaaaactcaaaaaggcagaaaaagacgcaaagtccatcctcgaa
aaagcagaaaaggaagcaaacgagataaagaaaaaggccattgtggaaggtagagaagaa
gttcacagattgagggaagagttcgaaagagaaagagcacgaaaggaagaagaactcaga
tcactcgaggaaaggcttctaaaaagggaagaacttctcaccagaaaggaagagaatctg
gaaaagagagaaatccagatcgaggaaatgaaagcaaaactggaagagaagatgaaagaa
gtggaagaaaaggaaaaacgaatagacgaagaactcaacaaactcgcgggtatgaccgtt
gaggaagcaagagagttgattctggaagaagcgagacagagatacgaacacgaccttgca
aagctctacaaagaaatgaaagagcaggtagaagaggaggccgaaaaagaagcaaagaag
gtcatagcgtttgccgtacaaagatacgcgccggattacgtgggagaaatcaccgtttcc
accgtttctcttccatccgatgatatgaaagggagaatcataggaagggaaggaagaaac
atcaggacctttgagaagatcacaggcgtcgatctgataatagacgacacaccagaagtg
gttgtgctttcctgtttcaatccactcagaagggagatcgcccgcatcactctggaaaaa
ctcgtagcagatgggaggatacatcctgcaaggatagaggagatgtacgaaaaggcaaaa
caggaagttgagaaggccataaaggaggcaggacaggaagccacattcaaagcaggagtt
atgggactccacccggaactcgtgaaactccttggaaaactcaaatacagaacaagttac
ggtcagaacgttttgaaccattccatagaggtggctcttcttgctggctacatggcttcg
gaactcggtttgaatgccgacaaagcaagaagaggtggactgctccacgacataggaaaa
gcggtggatcaggaactcgaaggatcacacaccaccataggggcagaacttgccagaaga
tacggtgaaaaagaagacatcatcaacatgatactcagtcaccacggagaagaagatcca
agaacaccagaagcggtgctcgtggcagccgccgatgcactgtctgccgcaagaccaggt
gcaagaagagaaagcctggaaaattacatcaagcgactcatgaaactcgaggaaattgca
aagagcttcaagtatgttgaaaaagcatacgctattcaggcgggaagagaaataagggtg
atagtggaaccggacaaggtggacgatgcactcgccgaaaaactcgcttacgacatctcg
aaaaagatagaagaagagctcgaatacccaggtgtgttgaaagtggtagtcataagagag
aaaagaagcgttgcttacgcaaaataa
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