KEGG   Thermotoga sp. RQ7: TRQ7_05611
Entry
TRQ7_05611        CDS       T03669                                 
Name
(GenBank) hypothetical protein
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
thr  Thermotoga sp. RQ7
Pathway
thr03030  DNA replication
thr03410  Base excision repair
thr03420  Nucleotide excision repair
thr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:thr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TRQ7_05611
   03410 Base excision repair
    TRQ7_05611
   03420 Nucleotide excision repair
    TRQ7_05611
   03440 Homologous recombination
    TRQ7_05611
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thr03032]
    TRQ7_05611
   03400 DNA repair and recombination proteins [BR:thr03400]
    TRQ7_05611
Enzymes [BR:thr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TRQ7_05611
DNA replication proteins [BR:thr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     TRQ7_05611
DNA repair and recombination proteins [BR:thr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     TRQ7_05611
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     TRQ7_05611
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5 DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: AJG40931
UniProt: A0A0B5KYZ6
LinkDB
Position
1114074..1116755
AA seq 893 aa
MARLFLFDGTALAYRAYYALDRSLSTSTGIPTNAVYGVARMLVKFIKEHIIPEKDYAAVA
FDKKAATFRHKLLEAYKAQRPKTPDLLVQQLPYIKRLIEALGFKVLELEGYEADDIIATL
AVKGCTFFDEIFIITGDKDMLQLVNEKIKVWRIVKGISDLELYDSKKVKERYGVEPHQIP
DLLALTGDEIDNIPGVTGIGEKTAVQLLGKYRNLEDILEHARELPQRVRKALLRDREVAI
LSKKLATLVTNAPVEVDWEEMKYRGYDKRKLLPILKELEFASIMKELQLYEEAEPTGYEI
VKDHKTFEDLIEKLKEVPSFALDLETSSLDPFNCEIVGISVSFKPKTAYYIPLHHRNAQN
LDETLVLSKLKEILEDPSSKIVGQNLKYDYKVLMVKGISPVYPHFDTMIAAYLLEPNEKK
FNLEDLSLKFLGYKMTSYQELMSFSSPLFGFSFADVPVDKAANYSCEDADITYRLYKILS
MKLHEAELENVFYRIEMPLVNVLARMELNGVYVDTEFLKKLSEEYGKKLEELAEKIYQIA
GEPFNINSPKQVSKILFEKLGIKPRGKTTKTGEYSTRIEVLEEIANEHEIVPLILEYRKI
QKLKSTYIDTLPKLVNPKTGRIHASFHQTGTATGRLSSSDPNLQNLPTKSEEGKEIRKAI
VPQDPDWWIVSADYSQIELRILAHLSGDENLVKAFEEGIDVHTLTASRIYNVKPEEVNEE
MRRVGKMVNFSIIYGVTPYGLSVRLGIPVKEAEKMIISYFTLYPKVRSYIQQVVAEAKEK
GYVRTLFGRKRDIPQLMARDKNTQSEGERIAINTPIQGTAADIIKLAMIDIDEELRKRNM
KSRMIIQVHDELVFEVPDEEKEELVDLVKNKMTNVVKLSVPLEVDISIGKSWS
NT seq 2682 nt   +upstreamnt  +downstreamnt
atggcgagactatttctctttgatggcacagccctggcctacagggcatattacgccctc
gacagatccctttccacatccacaggaattccaacgaacgccgtctatggcgttgccagg
atgctcgttaaattcataaaggaacacattatacccgaaaaggactacgcggctgtggcc
ttcgacaagaaggcagcgacgttcagacacaaactgctcgaagcgtacaaggcgcaaagg
ccaaagacgccggatcttctagttcagcagctaccttacatcaagcggctgatagaagct
cttggtttcaaagtgctggagctggaaggatacgaagcagacgatatcatcgccacgctt
gcagtcaagggctgcacgttttttgatgagattttcataataaccggtgacaaggatatg
cttcaacttgtaaacgagaagataaaggtctggagaatcgtcaaggggatatcggatctt
gagctttacgattcgaaaaaggtgaaagaaagatacggtgtggaaccacatcagataccg
gatcttctagcactgacgggagacgagatagacaacattcccggtgtaacgggaataggt
gaaaagaccgctgtacagcttctcggcaagtacagaaatcttgaagacattctggagcat
gcccgtgaactcccccagagagtgagaaaggctctcttgagagacagggaagttgccatc
ctcagtaaaaaacttgcaactctggtgacgaacgcacctgttgaagtggactgggaagag
atgaaatacagaggatacgacaagagaaaactacttccgatattgaaagaactggagttt
gcttccatcatgaaggaacttcaactgtacgaagaagcagaacccaccggatacgaaatc
gtgaaggatcataagaccttcgaagatctcatcgaaaagctgaaggaggttccatctttt
gccctggaccttgaaacgtcctcccttgacccgttcaactgtgagatagtcggcatctcc
gtgtcgttcaaaccgaaaacagcttattacattccacttcatcacagaaacgcccagaat
cttgatgaaacactggtgctgtcgaagttgaaagagatcctcgaagacccgtcttcgaag
attgtgggtcagaacctgaagtacgactacaaggttcttatggtaaagggtatatcgcca
gtttatccgcattttgacacgatgatagctgcatatttgctggagccaaacgagaaaaaa
ttcaatctcgaagatctgtctttgaaatttctcggatacaaaatgacgtcttatcaggaa
ctgatgtcgttttcctcaccactttttggtttcagctttgcggatgttccggtagacaag
gctgcgaactactcctgcgaggatgcagacatcacttataggctctacaagatactcagc
atgaagctccatgaagcggaacttgagaacgtcttctacaggatagagatgccgcttgtg
aacgttcttgcacgcatggaattgaacggggtgtatgtggacacagaattcctgaaaaag
ctctcggaggagtacggcaaaaagctcgaggaactggccgaaaaaatctaccagatagca
ggtgagcccttcaacatcaattctccaaaacaggtttcaaagatcctttttgagaagctg
ggaataaaaccccgtggaaaaacgacaaaaacaggagagtactctaccaggatagaggtg
ttggaagagatagcgaatgagcacgagatagtacccctcattctcgagtacagaaagatc
cagaaactgaaatcgacctacatagacacccttccgaaacttgtgaacccgaaaaccgga
agaattcatgcatctttccaccagacgggtaccgccactggcaggttgagtagcagtgat
ccaaatcttcagaatcttccgacaaagagcgaagagggaaaagaaattagaaaagcgatt
gtgccccaggatccagactggtggatcgtcagtgcggattattcccaaatagaactcaga
atcctcgctcatctcagtggtgatgagaaccttgtgaaggccttcgaggagggcatcgat
gtgcacaccttgactgcctccaggatctacaacgtaaagccagaagaagtgaacgaagaa
atgcgacgggttggaaagatggtgaacttctctataatatacggtgtcacaccgtacggt
ctttctgtgagacttggaataccggttaaagaagcagaaaagatgattatcagctatttc
acactgtatccaaaggtgcgaagctacatccagcaggttgttgcagaggcaaaagagaag
ggctacgtcaggactctctttggaagaaaaagagatattccccagctcatggcaagggac
aagaacacccagtccgaaggcgaaagaatcgcaataaacacccccattcagggaacggcg
gcagatataataaaattggctatgatagatatagacgaggagctgagaaaaagaaacatg
aaatccagaatgatcattcaggttcatgacgaactggtcttcgaggttcccgatgaggaa
aaagaagaactagttgatctggtgaagaacaaaatgacaaatgtggtgaaactctctgtg
cctcttgaggttgacataagcatcggaaaaagctggtcttga

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