KEGG   Thermotoga sp. RQ7: TRQ7_07125
Entry
TRQ7_07125        CDS       T03669                                 
Name
(GenBank) single-stranded DNA exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
thr  Thermotoga sp. RQ7
Pathway
thr03410  Base excision repair
thr03430  Mismatch repair
thr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:thr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TRQ7_07125
   03430 Mismatch repair
    TRQ7_07125
   03440 Homologous recombination
    TRQ7_07125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:thr03400]
    TRQ7_07125
DNA repair and recombination proteins [BR:thr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     TRQ7_07125
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     TRQ7_07125
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      TRQ7_07125
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 SelB_WH2 DUF2399
Other DBs
NCBI-ProteinID: AJG41220
UniProt: A0A0B5KXH3
LinkDB
Position
complement(1370840..1373677)
AA seq 945 aa
MKKWELSHPDEHAVKRISQRFDLSEIAARVLVNRGIDTEEAARSFLFTDETCQHDPFLFK
DMEKAVETLLQVRSEGQLVLIHGDYDVDGITSAVVLKEFLEENGWKVDVYIPHRIEEGYG
VQKENVLSFKEMGVSCLVTVDCGITAVESIDLAKRLGMRVIVTDHHEVNGDIPPADAVVN
PKVPGEDYPFRDLAGVGVTYKLVQALAQVLKYPDVEKYLELVALGTVADMVSLLDENRYF
VKKGIELLMKTERLGLKKLLEKLGLKKLTSHDISYKIAPRLNAAGRMGSATDAFVLLTMK
DPARTEGVVERLMELNNERRRIERQIYKEAVEKIEANDLWKDPIIVVAGENWHVGVIGIV
AAKLANRYEKPVAVVSLSDEYAKGSIRSYNGYDIMNAFSGDVLEIFDEIGGHSSAAGFSL
RKEHLESFKEYMKNVALEMKDEKVLVDAEVSLNDVDERFIEDIQLLMPFGQGNPEPVLLF
SDLLIEKIHFFGEDNSNVFLHLKDGERKLEVIGYNFKSLSNSFSALPVAPTRGSVVVNLR
PMGDGLSYYLVSLDVKPIFRVKSKEVSSLLKKAKEKKLLVRIPYPSRTKFLLSVKEETGG
RLGIISLTNASAQNVSGCLARYSSSNASGYVNSVFTRGLENDIVVFTLVGFLKHLPLNDF
DMFIVNEFQDFVSYSHNSQVQEFLNLLEKYPGKFLFVSSMKNPALEDFLRNSEYEVVDLK
TNELEEFLFSDQRGRFDLETLAGSSGFSIVVSEKRLIPNIYKKLGKKAVVYYAGMDLEKK
LKVVGLIESGSARKAILTSNTDGLPTHIRGDIIFYDFPFSIYEIVDLLRRRAVINLCYSS
QDMKRRRAELERLFPSPDKLEEIACATEKTKDRTELEKILESDYGIKGNVLKDLYMDLIE
ELRSGKTPWRVLEGDLEKRVFEDTVSVLTEDLKDLYSFFRDRVIR
NT seq 2838 nt   +upstreamnt  +downstreamnt
atgaaaaagtgggaactttcacaccctgatgaacacgctgtgaaaagaatttcacagcgt
tttgatctcagcgaaatagccgcaagggttctggtgaaccgtggtatcgacacagaagag
gctgcaagatcttttctgttcacagatgaaacctgccagcatgaccctttcctcttcaaa
gacatggagaaagccgttgaaaccctccttcaagttcgttccgaaggtcaactcgttctg
atccacggtgattacgatgtggacggaataacgtcagccgtcgtgctgaaagagttcctc
gaagagaacggctggaaggtggacgtctacatcccccatcggatcgaagaaggctacggc
gttcagaaggaaaacgttctttctttcaaggagatgggagtctcctgtcttgtgacggtc
gactgtgggatcacggccgttgaatccatagacctggcaaaaagactcggcatgagagtg
atcgtgaccgatcaccatgaggtgaatggagacattccacccgctgatgccgttgtgaac
ccgaaagtgccaggagaagactatcccttcagggaccttgcgggtgttggggtgacctac
aaactcgtacaggccctcgcccaggtgttgaaatatcccgatgtcgaaaagtacctggaa
ctggtggccctcggaacagtcgccgatatggtgtctctccttgacgagaacaggtatttc
gtgaaaaagggtatagaactcctcatgaaaacagaacgcctggggttgaaaaaactcctg
gagaaactgggattgaagaagctcacttcacacgatatcagttacaagatagccccccgt
ctcaacgcagcgggccgtatgggaagtgcaacggatgcctttgtgctgctgacgatgaaa
gatcctgccagaaccgaaggcgttgtggaaagattgatggagctgaacaacgaacgccga
agaatcgaaaggcagatatacaaagaggcagtcgagaagatcgaggcgaacgatctgtgg
aaagatcccatcatagtggttgccggagaaaactggcacgtgggggttataggtatcgta
gcagcaaaacttgccaacagatacgaaaaacccgtggcggtcgtctctctcagcgatgag
tacgccaagggctccataagaagttacaacggctacgacataatgaacgccttctccggt
gacgtcctggagatattcgatgaaataggaggacattcttctgctgcaggattctccctc
cgaaaagagcatctagaatctttcaaagagtacatgaaaaatgtcgccctggagatgaaa
gacgagaaagtgctggtggatgccgaagtgagcctcaacgacgtcgatgaaaggttcatc
gaggacattcagcttctcatgccgtttggtcagggaaatcccgagcctgtgctcctgttc
agcgacctgctcattgagaagatacacttcttcggagaagacaacagcaatgtctttctc
cacctgaaagatggagaaaggaaactggaagtgatcgggtacaacttcaagagtctctcg
aactcgttttctgcccttcccgttgctccaacaaggggtagcgttgtcgtcaacttgagg
cccatgggggatggtctgtcttactaccttgtttcgctggatgtgaaaccgatctttcgt
gtgaagagcaaagaagtgagttctcttctgaaaaaagcaaaagagaaaaaactgctggtc
agaattccatacccttccaggacgaagtttctcctttcggtgaaggaagaaaccggcgga
aggcttggaatcatttctctgacgaacgcttcagcacagaacgtctcaggttgtctggca
agatacagctcatcgaacgcatcaggatatgtgaattcggtcttcaccaggggtctggaa
aacgacatcgttgttttcactctggtgggtttcctgaaacatcttccactgaacgacttt
gatatgttcattgtaaacgaattccaggattttgtatcctacagccacaacagtcaggtt
caggagtttctgaaccttctggaaaaataccccgggaaatttctcttcgtctcctcgatg
aaaaatccggcccttgaagacttcttgagaaacagcgaatatgaggttgtggatctcaaa
acaaatgaactcgaagagtttctgttttcagatcagagaggtcgattcgaccttgaaaca
ctcgcaggttccagcggtttttcgatagtggtttccgaaaaaagactgatcccgaacatc
tacaaaaaactcggtaagaaagcggtcgtttactacgcaggcatggatctggagaaaaaa
ttgaaagtggtaggattgatagaaagcggatctgctcgaaaggcaattctcacgagtaac
accgatggtctgcccacccatatcaggggtgatattattttctacgactttccattcagc
atctacgagatcgtggaccttctaagaagaagagctgtcatcaacctgtgctattcatct
caggacatgaaaagacgtagggctgaactggaaagactgttccccagtccggataaactg
gaagagatagcctgtgcaactgaaaaaacgaaagacaggacagaactggagaagatcctc
gaaagcgattacggaataaaaggaaatgttttgaaggatctgtacatggacctgatagag
gagttgcgttccgggaaaactccatggagagttctggagggtgatcttgaaaagagggtt
ttcgaagatacggtttctgttctcacagaagacctgaaggatctgtactccttcttcagg
gacagggtgataaggtga

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