Thermotoga sp. RQ7: TRQ7_07125
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Entry
TRQ7_07125 CDS
T03669
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
thr
Thermotoga sp. RQ7
Pathway
thr03410
Base excision repair
thr03430
Mismatch repair
thr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TRQ7_07125
03430 Mismatch repair
TRQ7_07125
03440 Homologous recombination
TRQ7_07125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thr03400
]
TRQ7_07125
DNA repair and recombination proteins [BR:
thr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
TRQ7_07125
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TRQ7_07125
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TRQ7_07125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
SelB_WH2
DUF2399
Motif
Other DBs
NCBI-ProteinID:
AJG41220
UniProt:
A0A0B5KXH3
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All DBs
Position
complement(1370840..1373677)
Genome browser
AA seq
945 aa
AA seq
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MKKWELSHPDEHAVKRISQRFDLSEIAARVLVNRGIDTEEAARSFLFTDETCQHDPFLFK
DMEKAVETLLQVRSEGQLVLIHGDYDVDGITSAVVLKEFLEENGWKVDVYIPHRIEEGYG
VQKENVLSFKEMGVSCLVTVDCGITAVESIDLAKRLGMRVIVTDHHEVNGDIPPADAVVN
PKVPGEDYPFRDLAGVGVTYKLVQALAQVLKYPDVEKYLELVALGTVADMVSLLDENRYF
VKKGIELLMKTERLGLKKLLEKLGLKKLTSHDISYKIAPRLNAAGRMGSATDAFVLLTMK
DPARTEGVVERLMELNNERRRIERQIYKEAVEKIEANDLWKDPIIVVAGENWHVGVIGIV
AAKLANRYEKPVAVVSLSDEYAKGSIRSYNGYDIMNAFSGDVLEIFDEIGGHSSAAGFSL
RKEHLESFKEYMKNVALEMKDEKVLVDAEVSLNDVDERFIEDIQLLMPFGQGNPEPVLLF
SDLLIEKIHFFGEDNSNVFLHLKDGERKLEVIGYNFKSLSNSFSALPVAPTRGSVVVNLR
PMGDGLSYYLVSLDVKPIFRVKSKEVSSLLKKAKEKKLLVRIPYPSRTKFLLSVKEETGG
RLGIISLTNASAQNVSGCLARYSSSNASGYVNSVFTRGLENDIVVFTLVGFLKHLPLNDF
DMFIVNEFQDFVSYSHNSQVQEFLNLLEKYPGKFLFVSSMKNPALEDFLRNSEYEVVDLK
TNELEEFLFSDQRGRFDLETLAGSSGFSIVVSEKRLIPNIYKKLGKKAVVYYAGMDLEKK
LKVVGLIESGSARKAILTSNTDGLPTHIRGDIIFYDFPFSIYEIVDLLRRRAVINLCYSS
QDMKRRRAELERLFPSPDKLEEIACATEKTKDRTELEKILESDYGIKGNVLKDLYMDLIE
ELRSGKTPWRVLEGDLEKRVFEDTVSVLTEDLKDLYSFFRDRVIR
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtgggaactttcacaccctgatgaacacgctgtgaaaagaatttcacagcgt
tttgatctcagcgaaatagccgcaagggttctggtgaaccgtggtatcgacacagaagag
gctgcaagatcttttctgttcacagatgaaacctgccagcatgaccctttcctcttcaaa
gacatggagaaagccgttgaaaccctccttcaagttcgttccgaaggtcaactcgttctg
atccacggtgattacgatgtggacggaataacgtcagccgtcgtgctgaaagagttcctc
gaagagaacggctggaaggtggacgtctacatcccccatcggatcgaagaaggctacggc
gttcagaaggaaaacgttctttctttcaaggagatgggagtctcctgtcttgtgacggtc
gactgtgggatcacggccgttgaatccatagacctggcaaaaagactcggcatgagagtg
atcgtgaccgatcaccatgaggtgaatggagacattccacccgctgatgccgttgtgaac
ccgaaagtgccaggagaagactatcccttcagggaccttgcgggtgttggggtgacctac
aaactcgtacaggccctcgcccaggtgttgaaatatcccgatgtcgaaaagtacctggaa
ctggtggccctcggaacagtcgccgatatggtgtctctccttgacgagaacaggtatttc
gtgaaaaagggtatagaactcctcatgaaaacagaacgcctggggttgaaaaaactcctg
gagaaactgggattgaagaagctcacttcacacgatatcagttacaagatagccccccgt
ctcaacgcagcgggccgtatgggaagtgcaacggatgcctttgtgctgctgacgatgaaa
gatcctgccagaaccgaaggcgttgtggaaagattgatggagctgaacaacgaacgccga
agaatcgaaaggcagatatacaaagaggcagtcgagaagatcgaggcgaacgatctgtgg
aaagatcccatcatagtggttgccggagaaaactggcacgtgggggttataggtatcgta
gcagcaaaacttgccaacagatacgaaaaacccgtggcggtcgtctctctcagcgatgag
tacgccaagggctccataagaagttacaacggctacgacataatgaacgccttctccggt
gacgtcctggagatattcgatgaaataggaggacattcttctgctgcaggattctccctc
cgaaaagagcatctagaatctttcaaagagtacatgaaaaatgtcgccctggagatgaaa
gacgagaaagtgctggtggatgccgaagtgagcctcaacgacgtcgatgaaaggttcatc
gaggacattcagcttctcatgccgtttggtcagggaaatcccgagcctgtgctcctgttc
agcgacctgctcattgagaagatacacttcttcggagaagacaacagcaatgtctttctc
cacctgaaagatggagaaaggaaactggaagtgatcgggtacaacttcaagagtctctcg
aactcgttttctgcccttcccgttgctccaacaaggggtagcgttgtcgtcaacttgagg
cccatgggggatggtctgtcttactaccttgtttcgctggatgtgaaaccgatctttcgt
gtgaagagcaaagaagtgagttctcttctgaaaaaagcaaaagagaaaaaactgctggtc
agaattccatacccttccaggacgaagtttctcctttcggtgaaggaagaaaccggcgga
aggcttggaatcatttctctgacgaacgcttcagcacagaacgtctcaggttgtctggca
agatacagctcatcgaacgcatcaggatatgtgaattcggtcttcaccaggggtctggaa
aacgacatcgttgttttcactctggtgggtttcctgaaacatcttccactgaacgacttt
gatatgttcattgtaaacgaattccaggattttgtatcctacagccacaacagtcaggtt
caggagtttctgaaccttctggaaaaataccccgggaaatttctcttcgtctcctcgatg
aaaaatccggcccttgaagacttcttgagaaacagcgaatatgaggttgtggatctcaaa
acaaatgaactcgaagagtttctgttttcagatcagagaggtcgattcgaccttgaaaca
ctcgcaggttccagcggtttttcgatagtggtttccgaaaaaagactgatcccgaacatc
tacaaaaaactcggtaagaaagcggtcgtttactacgcaggcatggatctggagaaaaaa
ttgaaagtggtaggattgatagaaagcggatctgctcgaaaggcaattctcacgagtaac
accgatggtctgcccacccatatcaggggtgatattattttctacgactttccattcagc
atctacgagatcgtggaccttctaagaagaagagctgtcatcaacctgtgctattcatct
caggacatgaaaagacgtagggctgaactggaaagactgttccccagtccggataaactg
gaagagatagcctgtgcaactgaaaaaacgaaagacaggacagaactggagaagatcctc
gaaagcgattacggaataaaaggaaatgttttgaaggatctgtacatggacctgatagag
gagttgcgttccgggaaaactccatggagagttctggagggtgatcttgaaaagagggtt
ttcgaagatacggtttctgttctcacagaagacctgaaggatctgtactccttcttcagg
gacagggtgataaggtga
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