Thermococcus paralvinellae: TES1_0258
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Entry
TES1_0258 CDS
T03005
Name
(GenBank) exosome complex exonuclease 2
KO
K12589
exosome complex component RRP42
Organism
ths
Thermococcus paralvinellae
Pathway
ths03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ths00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TES1_0258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ths03019
]
TES1_0258
Messenger RNA biogenesis [BR:
ths03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TES1_0258
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
TES1_0258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
SRP54_N
Motif
Other DBs
NCBI-ProteinID:
AHF79653
UniProt:
W0I5I3
LinkDB
All DBs
Position
242042..242854
Genome browser
AA seq
270 aa
AA seq
DB search
MEVMASIMKDHIIELLKEKKRIDGRGLEDLRPLEIKVNVIEKAEGSAWVKLGNTQVLVGI
KLDLGEPFPDLPDKGVMTTNVELVPLASPTFEPGPPDERAIELARVVDRGIRESQAIDLE
KLVIVPGKLVRVVFIDVHVLDHDGNLVDAAGIGAIAALLSTKMPKIEYNEETGEVVMLDE
YEPLPVTKIPIPVSFAKIGGTIVVDPNLEEEQVMDGKLTITTDENGHISAVQKSEGGSFK
LEEVMYAVDVAFKRAQEIREKILEAVGKKE
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggaagttatggcttcgattatgaaagaccacatcattgaactcctaaaagagaagaag
agaattgatgggagaggcttggaggatttaagacctcttgaaataaaagttaatgtcatt
gaaaaggctgagggctcagcatgggttaagctcggtaacactcaagttctcgttggaatt
aagcttgatttgggtgagccttttccagacttgccagataagggtgttatgacaacaaac
gttgagcttgttccattggcttcaccgacctttgaaccgggccctccagatgagagggca
attgaactggctagagttgttgacaggggaataagagaaagtcaagcaattgatctagaa
aagctcgtcattgttccaggaaagctcgttagggtggttttcattgacgtccacgtcctt
gaccacgatggaaatcttgtagatgctgcaggaattggggcaattgcagctctgctttca
acaaagatgccaaaaattgaatacaacgaagagactggcgaagttgtgatgcttgatgag
tatgagccactgcctgtgactaagattccaattccagtgagctttgctaagattggagga
acaatagttgttgacccaaatcttgaagaagagcaggtaatggatggaaaattaacaata
acaacagacgagaatggccatatctcagcagtgcagaagagcgaaggtggaagcttcaag
cttgaggaagtcatgtatgcagttgatgttgcattcaaaagagcccaagagattagagag
aagattcttgaagctgtaggaaagaaggagtag
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