Thermococcus paralvinellae: TES1_0569
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Entry
TES1_0569 CDS
T03005
Name
(GenBank) tRNA-splicing endonuclease subunit alpha
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
ths
Thermococcus paralvinellae
Brite
KEGG Orthology (KO) [BR:
ths00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ths03016
]
TES1_0569
Enzymes [BR:
ths01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
TES1_0569
Transfer RNA biogenesis [BR:
ths03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
TES1_0569
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
AHF79959
UniProt:
W0I1T3
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All DBs
Position
complement(527741..528256)
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AA seq
171 aa
AA seq
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MKEPIAFYLSGERVFSEREKAINQFYNKRYFGEVINGKLFLSLIEAAYLVDKGKIKVFDG
NRELSLGELFDLGKKKDEQFDLKFLVYKDLRDRGYVVKTALKYGSHFRVYRKGMEEHSDW
LIWVVSESQKMFPNDLTARIRVAHGVRKKMIMAIVDEDNDIVYYQIERVKF
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggaaccaattgctttttatctaagcggagaaagggttttcagtgaaagagagaag
gcaataaatcagttttacaacaagcggtattttggagaagtcatcaacggaaagcttttc
ttatctctgattgaagccgcatacttggtggataaagggaaaattaaagtctttgatggg
aatagggagctgagcctgggagagctttttgatttaggaaagaagaaagacgagcagttt
gatctgaagtttttagtgtataaagatttaagagataggggatacgttgtaaaaactgcc
ctcaaatacggctcccactttagagtttatcgcaaagggatggaggaacattcagattgg
ctcatttgggttgtaagtgagagccaaaaaatgtttccaaatgatttaacggcaagaata
agggtcgcacacggagtgaggaagaaaatgatcatggcgattgttgatgaagataatgac
attgtatattaccagattgagagggtgaagttttaa
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