Thermococcus paralvinellae: TES1_0931
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Entry
TES1_0931 CDS
T03005
Name
(GenBank) RNA terminal phosphate cyclase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ths
Thermococcus paralvinellae
Brite
KEGG Orthology (KO) [BR:
ths00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ths03016
]
TES1_0931
Enzymes [BR:
ths01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
TES1_0931
Transfer RNA biogenesis [BR:
ths03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
TES1_0931
Prokaryotic type
tRNA splicing ligases
TES1_0931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AHF80317
UniProt:
W0I6D4
LinkDB
All DBs
Position
874767..876206
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AA seq
479 aa
AA seq
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MVPLKRLDQIRWEIPKFDKRMRVPGRVYADDVLIQKMRQDRTLEQAANVAMLPGIYKYSI
VMPDGHQGYGFPIGGVAAFDAKGGVISPGGVGYDINCGVRLIRTNLTEKEVRPKIKQLVD
TLFKNVPSGLGSKGRVRLQWTQLDDVLADGAKWAVDNGYGWDEDLERLEEGGRMEGANPS
YVSDTAKKRGAPQLGSLGSGNHFLEVQVVDKVFDPKVAEVYGLFEGQVVVMVHTGSRGLG
HQVASDYLRIMERANRKYGIPWPDRELVSVPFQSEEGQRYFSAMKAAANFAWANRQMITH
WVRESFEEVFRQKAEDLEMHIVYDVAHNIAKLEEHDVNGKKVKVVVHRKGATRAFPPGHK
AVPRIYRDVGQPVLIPGSMGTASYVLAGTEGAMKEAFGSTCHGAGRVLSRKAATRQYRGD
RLRNELMQRGIYIRAASLRVVAEEAPGAYKNVDNVVNVVAKAGIAKLVARMRPIGVAKG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggttccattaaaaaggcttgaccaaataagatgggagatacccaagtttgataaaagg
atgagagttcccggtagggtttatgcagatgacgtcttaatccagaagatgcgccaagat
agaacacttgagcaagctgcaaatgtagctatgcttcccggaatttacaagtactcaata
gttatgcccgacggtcatcaggggtatggtttcccaattggtggtgtcgctgcttttgac
gctaagggaggtgtcattagtcccggtggagtgggttatgacatcaattgtggtgtaaga
ttaattagaacaaacctaacagaaaaggaagttagaccaaagattaagcaacttgtagac
acactctttaagaatgtcccaagtggacttggaagcaaaggaagggttaggctccaatgg
actcagcttgatgatgtattggctgatggagcaaagtgggccgttgacaacggctatggc
tgggatgaagacttggagaggctggaagaaggaggaagaatggagggggcaaatccctca
tatgtaagtgatactgctaagaaaagaggagctccacagctcggtagcttaggttcagga
aatcacttcctagaagtgcaagttgttgacaaagtgtttgacccaaaagtggctgaagtt
tatggcctctttgagggacaagtagttgtcatggttcacactggttcaagaggattgggt
catcaggtagcaagcgattacttaagaattatggaaagagcaaacagaaagtacggaatt
ccatggccagacagagaattggtcagcgttccgttccagagtgaagagggtcaaagatac
ttctctgcaatgaaagcagcagcaaacttcgcctgggcaaatagacagatgattactcat
tgggtaagggaaagttttgaagaggtatttagacaaaaggctgaggatttggagatgcac
attgtttacgacgttgctcacaatatagccaagcttgaagagcacgatgtaaacggaaag
aaggtcaaagttgttgtccacagaaagggtgcaactagagcattcccaccgggacataaa
gcggtgccgagaatctatagagatgtcgggcaacctgtgctcattccaggttcaatggga
actgcaagctatgtcttagctggaactgagggtgcaatgaaagaggcatttggttcaaca
tgccacggtgctggaagagtcctcagcagaaaggctgctacaagacagtatagaggagac
aggctcaggaatgagctcatgcagagaggaatttacatcagggcagcaagcttgagggtt
gtcgcagaagaagctccaggagcatataagaacgttgacaatgttgttaatgttgttgca
aaggccggaattgcaaagttagttgcaagaatgaggccaattggagttgccaagggttga
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